Variant report

Variant	rs535167957
Chromosome Location	chr5:94618469-94618470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2515116	chr5:94617264-94618669	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
3	esv3341897	chr5:94618421-94620969	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94615800-94618800	Active TSS	Fetal Brain Female	brain
2	chr5:94616200-94619000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr5:94616800-94619000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr5:94617000-94618800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr5:94617400-94618800	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr5:94617400-94619000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr5:94617800-94618800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr5:94617800-94618800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr5:94617800-94618800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
10	chr5:94618200-94619000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr5:94618400-94618800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
12	chr5:94618400-94620000	Enhancers	Fetal Brain Male	brain
13	chr5:94618400-94621200	Active TSS	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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