Variant report

Variant	rs535178689
Chromosome Location	chr15:43563462-43563463
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044522	chr15:43115348-43658417	Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	nsv1044508	chr15:43270637-43658417	Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	esv3375708	chr15:43563184-43563528	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43551600-43565600	Weak transcription	Right Atrium	heart
2	chr15:43560000-43565400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr15:43560400-43563600	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr15:43560800-43563800	Enhancers	Primary hematopoietic stem cells	blood
5	chr15:43561400-43568000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:43562200-43563600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr15:43562400-43563600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
8	chr15:43562600-43563600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
9	chr15:43562600-43563600	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr15:43562800-43563600	Flanking Active TSS	Primary B cells from cord blood	blood
11	chr15:43563200-43563600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr15:43563200-43563800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr15:43563200-43566400	Weak transcription	Esophagus	oesophagus
14	chr15:43563400-43563800	Enhancers	Primary B cells from peripheral blood	blood
15	chr15:43563400-43565600	Weak transcription	Fetal Thymus	thymus

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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