Variant report

Variant rs535392840
Chromosome Location chr11:64491293-64491294
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64490000-64491400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
2 chr11:64490200-64491400 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr11:64490600-64491400 Active TSS Duodenum Smooth Muscle Duodenum
4 chr11:64490600-64491400 Active TSS K562 blood
5 chr11:64490600-64492000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:64490800-64491400 Flanking Active TSS Primary B cells from cord blood blood
7 chr11:64490800-64491400 Flanking Active TSS Primary B cells from peripheral blood blood
8 chr11:64490800-64491400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:64490800-64491400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr11:64490800-64491400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:64490800-64491400 Flanking Bivalent TSS/Enh Fetal Stomach stomach
12 chr11:64490800-64491400 Flanking Active TSS Dnd41 blood
13 chr11:64490800-64491400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
14 chr11:64490800-64491600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr11:64490800-64491600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
16 chr11:64490800-64491800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr11:64490800-64491800 Flanking Active TSS GM12878-XiMat blood
18 chr11:64490800-64492200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr11:64490800-64498000 Enhancers Liver Liver
20 chr11:64491000-64491400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr11:64491000-64491400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
22 chr11:64491000-64491400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr11:64491000-64491400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr11:64491000-64491400 Flanking Active TSS Brain Germinal Matrix brain
25 chr11:64491000-64491400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
26 chr11:64491000-64491600 Flanking Active TSS Spleen Spleen
27 chr11:64491000-64494200 Enhancers Fetal Brain Male brain
28 chr11:64491000-64502200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr11:64491200-64491400 Flanking Active TSS H1 Cell Line embryonic stem cell
30 chr11:64491200-64491400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:64491200-64491400 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:64491200-64491400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr11:64491200-64491400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr11:64491200-64491400 Enhancers Primary neutrophils fromperipheralblood blood
35 chr11:64491200-64491400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr11:64491200-64491400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
37 chr11:64491200-64491400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr11:64491200-64491400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:64491200-64491400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:64491200-64491400 Enhancers Adipose Nuclei Adipose
41 chr11:64491200-64491400 Enhancers Brain Angular Gyrus brain
42 chr11:64491200-64491400 Flanking Active TSS Brain Anterior Caudate brain
43 chr11:64491200-64491400 Flanking Active TSS Brain Cingulate Gyrus brain
44 chr11:64491200-64491400 Flanking Active TSS Brain Hippocampus Middle brain
45 chr11:64491200-64491400 Flanking Active TSS Brain Inferior Temporal Lobe brain
46 chr11:64491200-64491400 Bivalent Enhancer Colonic Mucosa Colon
47 chr11:64491200-64491400 Enhancers Colon Smooth Muscle Colon
48 chr11:64491200-64491400 Weak transcription Esophagus oesophagus
49 chr11:64491200-64491400 Enhancers Fetal Muscle Leg muscle
50 chr11:64491200-64491400 Enhancers Pancreas Pancrea

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