Variant report

Variant	rs535445467
Chromosome Location	chr6:132347301-132347302
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470861	chr6:132291785-132351866	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv886672	chr6:132299748-132349215	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv886673	chr6:132299748-132363507	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
4	nsv427768	chr6:132300468-132398477	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv970164	chr6:132347231-132347731	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132343600-132348800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:132346400-132347400	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr6:132346400-132347800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr6:132346400-132349200	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr6:132346600-132347400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr6:132346600-132347600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr6:132346600-132347600	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr6:132346600-132347800	Enhancers	H1 Cell Line	embryonic stem cell
9	chr6:132346800-132347600	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr6:132346800-132347600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:132346800-132347800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
12	chr6:132346800-132347800	Enhancers	H9 Cell Line	embryonic stem cell
13	chr6:132347200-132347600	Enhancers	HepG2	liver
14	chr6:132347200-132347800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr6:132347200-132348400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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