Variant report

Variant	rs535473948
Chromosome Location	chr7:86230258-86230259
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025032	chr7:86032479-86642973	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1017470	chr7:86221308-86263909	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv526622	chr7:86222259-86260816	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2764034	chr7:86227204-86245054	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:86229600-86230800	Enhancers	Brain Hippocampus Middle	brain
2	chr7:86229800-86230600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:86230000-86230400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:86230000-86230800	Enhancers	Brain Anterior Caudate	brain
5	chr7:86230000-86230800	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr7:86230200-86230600	Enhancers	H1 Cell Line	embryonic stem cell
7	chr7:86230200-86230600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr7:86230200-86230600	Flanking Active TSS	Brain Substantia Nigra	brain
9	chr7:86230200-86231000	Enhancers	Brain Angular Gyrus	brain
10	chr7:86230200-86231600	Enhancers	Brain Cingulate Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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