The 2.0 version of rSNPBase

Variant report

Variant rs535616290
Chromosome Location chr10:118705928-118705929
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118651800-118706600 Weak transcription Muscle Satellite Cultured Cells --
2 chr10:118652000-118736200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr10:118653200-118706800 Weak transcription H9 Cell Line embryonic stem cell
4 chr10:118653400-118707600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr10:118663800-118707000 Weak transcription Stomach Smooth Muscle stomach
6 chr10:118673000-118706400 Weak transcription NH-A brain
7 chr10:118673800-118706400 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr10:118675000-118706600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr10:118678000-118706600 Weak transcription Placenta Amnion Placenta Amnion
10 chr10:118680000-118706800 Weak transcription H1 Cell Line embryonic stem cell
11 chr10:118687200-118706600 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr10:118690200-118706400 Weak transcription HSMM muscle
13 chr10:118694800-118706600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr10:118695800-118706400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr10:118697200-118706600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr10:118697600-118707000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr10:118697800-118706600 Weak transcription HSMMtube muscle
18 chr10:118698000-118706400 Weak transcription NHDF-Ad bronchial
19 chr10:118698200-118706600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr10:118699000-118706200 Weak transcription Lung lung
21 chr10:118699000-118706800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr10:118699000-118707600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr10:118699200-118707000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:118699200-118709800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr10:118699200-118710400 Weak transcription Pancreas Pancrea
26 chr10:118699200-118712400 Weak transcription Esophagus oesophagus
27 chr10:118699200-118724200 Weak transcription Fetal Intestine Small intestine
28 chr10:118699200-118740600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr10:118699200-118748200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr10:118700000-118710400 Weak transcription Adipose Nuclei Adipose
31 chr10:118700000-118736800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr10:118700200-118706600 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr10:118700200-118706800 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr10:118700200-118712400 Weak transcription Placenta Placenta
35 chr10:118701000-118733400 Weak transcription Fetal Kidney kidney
36 chr10:118702400-118727200 Weak transcription Stomach Mucosa stomach
37 chr10:118702600-118706600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr10:118703000-118706400 Weak transcription Hela-S3 cervix
39 chr10:118703000-118706400 Weak transcription HUVEC blood vessel
40 chr10:118703200-118706600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr10:118703200-118721000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr10:118703400-118706400 Weak transcription K562 blood
43 chr10:118703400-118720600 Weak transcription Fetal Brain Male brain
44 chr10:118703400-118737000 Weak transcription Aorta Aorta
45 chr10:118703600-118706400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr10:118703600-118706400 Weak transcription HMEC breast
47 chr10:118703600-118710000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr10:118703600-118740000 Weak transcription Duodenum Mucosa Duodenum
49 chr10:118703600-118752200 Weak transcription Gastric stomach
50 chr10:118703800-118706400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015