Variant report

Variant	rs535704982
Chromosome Location	chr4:152990390-152990391
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432644	chr4:152635395-153023402	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv880341	chr4:152861685-153110256	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv931416	chr4:152877808-153440553	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv461679	chr4:152935555-152992741	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv595734	chr4:152935555-152992741	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3466425	chr4:152988702-152994200	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv968029	chr4:152988941-152994456	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv7858	chr4:152990099-152994161	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3466423	chr4:152990177-152994054	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3466422	chr4:152990236-152994020	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3466424	chr4:152990248-152993974	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	nsv441922	chr4:152990286-152992739	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv1798651	chr4:152990286-152992741	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv1801519	chr4:152990286-152992741	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv1812872	chr4:152990286-152992741	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv2422051	chr4:152990286-152992741	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3468173	chr4:152990287-152993928	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3466426	chr4:152990297-152993952	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3466427	chr4:152990312-152993950	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv3468176	chr4:152990312-152993950	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv16827	chr4:152990384-152993935	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152983800-153000800	Enhancers	Fetal Thymus	thymus
2	chr4:152985200-152993400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:152985200-152996200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr4:152985200-153000000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
5	chr4:152986600-152993200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr4:152986800-152998000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr4:152988800-152993600	Weak transcription	Right Atrium	heart
8	chr4:152989200-152992200	Enhancers	Primary T cells from cord blood	blood
9	chr4:152989400-153000400	Enhancers	Thymus	Thymus
10	chr4:152989600-152990400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr4:152989600-152990600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
12	chr4:152989600-152990600	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr4:152989600-152992400	Enhancers	Dnd41	blood
14	chr4:152989800-152990400	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr4:152989800-152990400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr4:152990000-152990400	Enhancers	Primary T cells fromperipheralblood	blood
17	chr4:152990000-152990400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr4:152990000-152990400	Enhancers	Primary T killer memory cells from peripheral blood	blood
19	chr4:152990000-152990800	Enhancers	Primary T helper cells fromperipheralblood	blood

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