Variant report

Variant	rs535805131
Chromosome Location	chr2:182411201-182411202
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005870	chr2:181968637-182921439	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv536063	chr2:181968637-182921439	Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv1014910	chr2:182375267-182544114	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
4	nsv536065	chr2:182375267-182544114	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
5	nsv869674	chr2:182409485-182468632	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182401400-182417600	Weak transcription	NHDF-Ad	bronchial
2	chr2:182402800-182414600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr2:182405600-182413800	Weak transcription	Primary B cells from peripheral blood	blood
4	chr2:182405600-182414600	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr2:182405600-182415200	Weak transcription	Dnd41	blood
6	chr2:182406000-182415400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr2:182406200-182414600	Weak transcription	Thymus	Thymus
8	chr2:182406200-182414600	Weak transcription	GM12878-XiMat	blood
9	chr2:182406400-182415000	Weak transcription	Primary T cells from cord blood	blood
10	chr2:182406800-182415400	Weak transcription	Primary B cells from cord blood	blood
11	chr2:182406800-182418200	Weak transcription	Fetal Thymus	thymus
12	chr2:182410000-182411600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr2:182410800-182419200	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr2:182411200-182412400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr2:182411200-182416800	Weak transcription	HMEC	breast
16	chr2:182411200-182417000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr2:182411200-182417000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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