The 2.0 version of rSNPBase

Variant report

Variant rs535995283
Chromosome Location chr3:42837599-42837600
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42814800-42840800 Weak transcription Spleen Spleen
2 chr3:42815200-42842000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr3:42815200-42842200 Weak transcription Aorta Aorta
4 chr3:42815200-42842400 Weak transcription Psoas Muscle Psoas
5 chr3:42815400-42844000 Weak transcription NHDF-Ad bronchial
6 chr3:42815600-42841800 Weak transcription Thymus Thymus
7 chr3:42815600-42842000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr3:42815600-42842000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:42816200-42837600 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr3:42822000-42841200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr3:42822400-42843400 Weak transcription Small Intestine intestine
12 chr3:42822800-42841600 Weak transcription Brain Substantia Nigra brain
13 chr3:42822800-42842800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:42822800-42844000 Weak transcription Fetal Kidney kidney
15 chr3:42822800-42844200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr3:42823000-42842800 Weak transcription Fetal Brain Male brain
17 chr3:42825200-42843800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr3:42825600-42841000 Weak transcription Gastric stomach
19 chr3:42826800-42838400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:42827600-42844600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr3:42828000-42840800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:42828400-42841000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:42828600-42844000 Weak transcription NH-A brain
24 chr3:42829800-42838200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:42830000-42840800 Weak transcription Primary B cells from peripheral blood blood
26 chr3:42830200-42841000 Weak transcription Stomach Mucosa stomach
27 chr3:42830400-42844000 Weak transcription NHEK skin
28 chr3:42830800-42841800 Weak transcription Fetal Thymus thymus
29 chr3:42832600-42838400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:42832800-42842000 Weak transcription Fetal Heart heart
31 chr3:42832800-42843800 Weak transcription Muscle Satellite Cultured Cells --
32 chr3:42834400-42838000 Strong transcription K562 blood
33 chr3:42835200-42842200 Weak transcription Fetal Lung lung
34 chr3:42835400-42838000 Weak transcription Fetal Muscle Leg muscle
35 chr3:42835400-42841000 Weak transcription Pancreas Pancrea
36 chr3:42835400-42841200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:42835400-42841200 Weak transcription Rectal Smooth Muscle rectum
38 chr3:42835400-42841800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr3:42835400-42842400 Weak transcription Right Ventricle heart
40 chr3:42835400-42842600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr3:42835400-42843400 Weak transcription Colonic Mucosa Colon
42 chr3:42835400-42843400 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr3:42835400-42843400 Weak transcription HSMMtube muscle
44 chr3:42835400-42844000 Weak transcription Osteobl bone
45 chr3:42835400-42844200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr3:42835400-42844200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr3:42835400-42844200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr3:42835400-42844200 Weak transcription Fetal Stomach stomach
49 chr3:42835400-42844200 Weak transcription A549 lung
50 chr3:42835400-42844200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015