The 2.0 version of rSNPBase

Variant report

Variant rs536176383
Chromosome Location chr18:43558016-43558017
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43548000-43567000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:43548200-43562800 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr18:43554200-43567200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr18:43554400-43558200 Enhancers Primary neutrophils fromperipheralblood blood
5 chr18:43554400-43566200 Weak transcription Liver Liver
6 chr18:43554600-43558800 Weak transcription Primary B cells from cord blood blood
7 chr18:43554600-43560000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr18:43554600-43560000 Weak transcription Duodenum Mucosa Duodenum
9 chr18:43554600-43560000 Weak transcription Fetal Heart heart
10 chr18:43554600-43560000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr18:43554600-43560000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr18:43554600-43562600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr18:43554600-43563000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr18:43554600-43566200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr18:43554600-43566800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr18:43554600-43567400 Weak transcription Adipose Nuclei Adipose
17 chr18:43554600-43567800 Weak transcription Primary T cells from cord blood blood
18 chr18:43554600-43567800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr18:43554600-43568000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr18:43554600-43568800 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr18:43554600-43571400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr18:43554800-43558200 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr18:43555000-43562600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr18:43557200-43558800 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr18:43557200-43558800 Enhancers Pancreas Pancrea
26 chr18:43557200-43567200 Weak transcription Osteobl bone
27 chr18:43557200-43573400 Weak transcription NHLF lung
28 chr18:43557400-43558600 Enhancers ES-WA7 Cell Line embryonic stem cell
29 chr18:43557400-43558600 Enhancers HUES6 Cell Line embryonic stem cell
30 chr18:43557400-43558600 Enhancers HUES64 Cell Line embryonic stem cell
31 chr18:43557400-43558600 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr18:43557400-43558600 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr18:43557400-43560000 Weak transcription K562 blood
34 chr18:43557400-43567200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr18:43557400-43567200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr18:43557600-43558600 Enhancers H9 Cell Line embryonic stem cell
37 chr18:43557600-43559800 Weak transcription Left Ventricle heart
38 chr18:43557600-43561800 Weak transcription HUVEC blood vessel
39 chr18:43557800-43558400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr18:43557800-43567000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015