Variant report

Variant	rs536191500
Chromosome Location	chr3:195717592-195717593
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:195716072-195717790	Hela-S3	cervix:	n/a	n/a
2	FOSL2	chr3:195716098-195717872	HepG2	liver:	n/a	n/a
3	CBX3	chr3:195717317-195717855	K562	blood:	n/a	n/a
4	SP1	chr3:195716993-195717684	HepG2	liver:	n/a	chr3:195717261-195717273 chr3:195717562-195717573 chr3:195717262-195717271 chr3:195717491-195717505 chr3:195717562-195717574
5	POLR2A	chr3:195716956-195717618	GM12891	blood:	n/a	n/a
6	RUNX3	chr3:195717481-195717719	GM12878	blood:	n/a	n/a
7	TAF1	chr3:195716865-195717839	Hela-S3	cervix:	n/a	n/a
8	SIN3AK20	chr3:195716856-195717750	SK-N-SH	brain:	n/a	n/a
9	YY1	chr3:195717408-195717700	A549	lung:	n/a	n/a
10	SP1	chr3:195716969-195717885	A549	lung:	n/a	chr3:195717261-195717273 chr3:195717562-195717573 chr3:195717262-195717271 chr3:195717491-195717505 chr3:195717562-195717574
11	BATF	chr3:195717540-195717834	GM12878	blood:	n/a	n/a
12	CTCF	chr3:195717067-195717671	K562	blood:	n/a	chr3:195717520-195717538
13	POLR2A	chr3:195717045-195717601	GM12892	blood:	n/a	n/a
14	RXRA	chr3:195716033-195717786	HepG2	liver:	n/a	chr3:195716822-195716833 chr3:195716941-195716961 chr3:195717520-195717540 chr3:195716821-195716834 chr3:195716821-195716834
15	POU2F2	chr3:195716069-195717886	GM12878	blood:	n/a	chr3:195716352-195716373 chr3:195717491-195717503
16	HA-E2F1	chr3:195717195-195717624	MCF-7	breast:	n/a	chr3:195717225-195717234 chr3:195717274-195717284 chr3:195717347-195717361 chr3:195717277-195717286 chr3:195717495-195717507
17	MTA3	chr3:195717248-195717792	GM12878	blood:	n/a	n/a
18	HEY1	chr3:195716034-195718218	HepG2	liver:	n/a	n/a
19	HEY1	chr3:195716149-195717857	K562	blood:	n/a	n/a
20	EP300	chr3:195717333-195717788	GM12878	blood:	n/a	n/a
21	POLR2A	chr3:195716767-195718685	SK-N-MC	brain:	n/a	n/a
22	HEY1	chr3:195715295-195717943	K562	blood:	n/a	n/a
23	CEBPD	chr3:195716909-195717795	K562	blood:	n/a	n/a
24	GTF3C2	chr3:195717245-195717872	K562	blood:	n/a	n/a
25	CTCF	chr3:195717366-195717594	K562	blood:	n/a	chr3:195717520-195717538
26	SP1	chr3:195716129-195717898	GM12878	blood:	n/a	chr3:195716923-195716937 chr3:195717261-195717273 chr3:195717562-195717573 chr3:195717262-195717271 chr3:195717491-195717505 chr3:195717562-195717574
27	ZNF143	chr3:195717418-195717604	K562	blood:	n/a	chr3:195717522-195717540
28	POLR2A	chr3:195716998-195717737	HCT-116	colon:	n/a	n/a
29	TCF7L2	chr3:195716908-195717784	HCT-116	colon:	n/a	n/a
30	MAX	chr3:195716981-195717765	K562	blood:	n/a	n/a
31	GTF3C2	chr3:195717424-195717785	Hela-S3	cervix:	n/a	n/a
32	POLR2A	chr3:195715766-195717788	GM12878	blood:	n/a	n/a
33	POLR2A	chr3:195717053-195717615	K562	blood:	n/a	n/a
34	EGR1	chr3:195717423-195717676	H1-hESC	embryonic stem cell:	n/a	n/a
35	POLR2A	chr3:195716419-195717790	A549	lung:	n/a	n/a
36	POLR2A	chr3:195716980-195717695	ECC-1	luminal epithelium:	n/a	n/a
37	PAX5	chr3:195716313-195717913	GM12878	blood:	n/a	chr3:195717050-195717060
38	TAF1	chr3:195717439-195717690	K562	blood:	n/a	n/a
39	HEY1	chr3:195716580-195717829	HepG2	liver:	n/a	n/a
40	POLR2A	chr3:195716946-195717877	SK-N-SH	brain:	n/a	n/a
41	POLR2A	chr3:195716634-195717703	Raji	blood:	n/a	n/a
42	NR2F2	chr3:195716083-195717907	K562	blood:	n/a	n/a
43	PAX5	chr3:195716913-195717822	GM12878	blood:	n/a	chr3:195717050-195717060
44	EBF1	chr3:195716941-195717720	GM12878	blood:	n/a	chr3:195717521-195717532
45	POLR2A	chr3:195716990-195717687	K562	blood:	n/a	n/a
46	MYC	chr3:195717080-195717729	K562	blood:	n/a	n/a
47	POLR2A	chr3:195717059-195717708	K562	blood:	n/a	n/a
48	POLR2A	chr3:195716195-195717995	GM12892	blood:	n/a	n/a
49	POLR2A	chr3:195716113-195717862	GM12892	blood:	n/a	n/a
50	ZBTB7A	chr3:195716969-195717684	K562	blood:	n/a	chr3:195717471-195717478

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:195717574-195717624	HEEpiC	esophagus:	n/a
2	chr3:195717574-195717624	NT2-D1	testis:	n/a
3	chr3:195717574-195717624	HCM	heart:	n/a
4	chr3:195717574-195717624	HNPCEpiC	eye:	n/a
5	chr3:195717574-195717624	NHDF-neo	bronchial:	n/a
6	chr3:195717574-195717624	LNCaP	prostate:	n/a
7	chr3:195717574-195717624	SK-N-MC	brain:	n/a
8	chr3:195717574-195717624	HRE	kidney:	n/a
9	chr3:195717574-195717624	GM06990	blood:	n/a
10	chr3:195717574-195717624	PFSK-1	brain:	n/a
11	chr3:195717574-195717624	AG04450	lung:	fetal
12	chr3:195717574-195717624	SK-N-SH_RA	brain:	n/a
13	chr3:195717574-195717624	Hela-S3	cervix:	n/a
14	chr3:195717574-195717624	GM12892	blood:	n/a
15	chr3:195717574-195717624	Hepatocyte	liver:	n/a
16	chr3:195717574-195717624	MCF-7	breast:	n/a
17	chr3:195717574-195717624	AG09319	gingival:	n/a
18	chr3:195717574-195717624	AG10803	skin:	n/a
19	chr3:195717574-195717624	ECC-1	luminal epithelium:	n/a
20	chr3:195717574-195717624	BE2_C	brain:	n/a
21	chr3:195717574-195717624	A549	lung:	n/a
22	chr3:195717574-195717624	HMEC	breast:	n/a
23	chr3:195717574-195717624	AG04449	skin:	fetal
24	chr3:195717574-195717624	Caco-2	colon:	n/a
25	chr3:195717574-195717624	ProgFib	skin:	n/a
26	chr3:195717574-195717624	ovcar-3	ovarian:	n/a
27	chr3:195717574-195717624	SKMC	muscle:	n/a
28	chr3:195717574-195717624	HRPEpiC	eye:	n/a
29	chr3:195717574-195717624	AG09309	skin:	n/a
30	chr3:195717574-195717624	HL-60	blood:	n/a
31	chr3:195717574-195717624	H1-hESC	embryonic stem cell:	embryo
32	chr3:195717574-195717624	HepG2	liver:	n/a
33	chr3:195717574-195717624	HAEpiC	amniotic membrane:	n/a
34	chr3:195717574-195717624	NHBE	bronchial:	n/a
35	chr3:195717574-195717624	HUVEC	blood vessel:	n/a
36	chr3:195717574-195717624	MCF10A-Er-Src	breast:	n/a
37	chr3:195717574-195717624	HIPEpiC	eye:	n/a
38	chr3:195717574-195717624	T-47D	breast:	n/a
39	chr3:195717574-195717624	HRCEpiC	kidney:	n/a
40	chr3:195717574-195717624	HCT-116	colon:	n/a
41	chr3:195717574-195717624	AoSMC	blood vessel:	n/a
42	chr3:195717574-195717624	HPAEpiC	pulmonary alveolar:	n/a
43	chr3:195717574-195717624	SK-N-SH	brain:	n/a
44	chr3:195717574-195717624	GM19239	blood:	n/a
45	chr3:195717574-195717624	HCPEpiC	choroid plexus:	n/a
46	chr3:195717574-195717624	SAEC	small airway:	n/a
47	chr3:195717574-195717624	GM12878	blood:	n/a
48	chr3:195717574-195717624	PrEC	prostate:	n/a
49	chr3:195717574-195717624	GM12891	blood:	n/a
50	chr3:195717574-195717624	PANC-1	pancreas:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:195384346..195385021-chr3:195716746..195717598,2	HCT-116	colon:
2	chr3:195384344..195385079-chr3:195717098..195717747,2	MCF-7	breast:

Variant related genes	Relation type
SDHAP1	TF binding region
SDHAP1	CpG island
ENSG00000229178	Chromatin interaction
ENSG00000215837	Chromatin interaction
ENSG00000242086	Chromatin interaction

Extended variants
information (count: 47 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:47 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
5	nsv1006165	chr3:195383130-195777211	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
6	nsv471621	chr3:195417664-195795474	Flanking Active TSS Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
7	esv2754016	chr3:195433543-195753766	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
8	nsv822410	chr3:195438740-195725565	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
9	nsv530397	chr3:195565159-195740416	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
10	nsv1002629	chr3:195582468-195769275	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
11	nsv829827	chr3:195608866-195760829	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
12	nsv469518	chr3:195623722-195795474	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
13	nsv482784	chr3:195623722-195795474	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
14	nsv1010395	chr3:195641908-195848264	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
15	nsv532213	chr3:195643944-196063636	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
16	nsv10385	chr3:195650964-195739806	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
17	esv1822059	chr3:195651349-195776737	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
18	esv1844691	chr3:195651349-195776737	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
19	esv1820982	chr3:195651349-195835519	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
20	nsv997797	chr3:195658360-196212958	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
21	esv17805	chr3:195662762-195733839	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
22	nsv820779	chr3:195662762-195733839	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
23	esv1849611	chr3:195662864-195736134	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
24	esv3487234	chr3:195664550-195724142	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
25	esv3487235	chr3:195664550-195724142	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
26	esv1845231	chr3:195664641-195724169	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
27	esv1846114	chr3:195664641-195734827	Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
28	esv1819244	chr3:195665342-195740346	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
29	esv3515192	chr3:195668506-195727998	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
30	esv3515193	chr3:195668506-195727998	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
31	esv3500060	chr3:195668635-195727950	Strong transcription Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
32	esv3500059	chr3:195668717-195728000	Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
33	esv1845402	chr3:195672244-195723617	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
34	esv20134	chr3:195673006-195720655	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
35	esv3512247	chr3:195674252-195722317	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
36	esv3512248	chr3:195674252-195722317	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
37	esv3331676	chr3:195674350-195722846	Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
38	esv1848667	chr3:195675779-195722758	Genic enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
39	nsv511234	chr3:195677895-195717746	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
40	nsv878170	chr3:195677895-195871388	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
41	nsv878171	chr3:195677895-195959924	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
42	esv3392876	chr3:195691755-195726053	Active TSS Strong transcription Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
43	esv3402010	chr3:195691755-195726353	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
44	nsv1008512	chr3:195709662-195974936	Strong transcription Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
45	nsv979913	chr3:195710771-195733870	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
46	esv3438318	chr3:195714755-195719153	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
47	esv3432485	chr3:195717255-195726253	Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195697400-195717600	Weak transcription	Fetal Heart	heart
2	chr3:195715400-195717800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr3:195715400-195717800	Active TSS	Fetal Brain Female	brain
4	chr3:195715600-195717600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr3:195715600-195717600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr3:195715600-195717600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr3:195715600-195717600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr3:195715600-195717600	Active TSS	Fetal Intestine Large	intestine
9	chr3:195715600-195717600	Active TSS	HepG2	liver
10	chr3:195715600-195717800	Active TSS	Muscle Satellite Cultured Cells	--
11	chr3:195715600-195717800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr3:195715600-195717800	Active TSS	Colonic Mucosa	Colon
13	chr3:195715600-195717800	Active TSS	Rectal Smooth Muscle	rectum
14	chr3:195715600-195717800	Active TSS	NHLF	lung
15	chr3:195715600-195718000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr3:195715600-195718400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr3:195715800-195717600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr3:195715800-195717600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr3:195715800-195717600	Active TSS	Stomach Smooth Muscle	stomach
20	chr3:195715800-195717600	Active TSS	NHEK	skin
21	chr3:195715800-195717800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr3:195715800-195717800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr3:195715800-195717800	Active TSS	iPS-15b Cell Line	embryonic stem cell
24	chr3:195715800-195717800	Active TSS	iPS-18 Cell Line	embryonic stem cell
25	chr3:195715800-195717800	Active TSS	Brain Germinal Matrix	brain
26	chr3:195715800-195717800	Active TSS	Left Ventricle	heart
27	chr3:195715800-195717800	Active TSS	Right Atrium	heart
28	chr3:195715800-195717800	Active TSS	Right Ventricle	heart
29	chr3:195715800-195717800	Active TSS	HMEC	breast
30	chr3:195715800-195717800	Active TSS	HSMM	muscle
31	chr3:195715800-195718000	Active TSS	HUES6 Cell Line	embryonic stem cell
32	chr3:195715800-195718000	Active TSS	iPS-20b Cell Line	embryonic stem cell
33	chr3:195715800-195718000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr3:195715800-195718000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr3:195716000-195717600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr3:195716000-195717600	Active TSS	Adipose Nuclei	Adipose
37	chr3:195716000-195717600	Active TSS	Esophagus	oesophagus
38	chr3:195716000-195717600	Active TSS	Fetal Muscle Leg	muscle
39	chr3:195716000-195717600	Active TSS	Pancreas	Pancrea
40	chr3:195716000-195717600	Active TSS	Skeletal Muscle Female	skeletal muscle
41	chr3:195716000-195717800	Active TSS	Duodenum Mucosa	Duodenum
42	chr3:195716000-195717800	Active TSS	Hela-S3	cervix
43	chr3:195716000-195717800	Active TSS	HUVEC	blood vessel
44	chr3:195716000-195717800	Active TSS	Monocytes-CD14+_RO01746	blood
45	chr3:195716000-195717800	Active TSS	NH-A	brain
46	chr3:195716000-195717800	Active TSS	Osteobl	bone
47	chr3:195716000-195718000	Active TSS	Primary T helper cells fromperipheralblood	blood
48	chr3:195716000-195718000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr3:195716000-195718000	Active TSS	A549	lung
50	chr3:195716000-195718000	Active TSS	K562	blood

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