Variant report

Variant	rs536235945
Chromosome Location	chr14:38358406-38358407
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916985	chr14:38052347-38838551	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
2	nsv1051120	chr14:38294270-38436127	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv542046	chr14:38294270-38436127	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv564386	chr14:38311855-38365605	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv564387	chr14:38357864-38563111	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:38357800-38358800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr14:38358200-38358600	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr14:38358200-38358600	Enhancers	Fetal Heart	heart
4	chr14:38358200-38358600	Enhancers	Fetal Lung	lung
5	chr14:38358200-38358600	Enhancers	Fetal Muscle Leg	muscle
6	chr14:38358200-38358600	Enhancers	Gastric	stomach
7	chr14:38358200-38358600	Enhancers	Pancreas	Pancrea
8	chr14:38358200-38358600	Enhancers	Right Atrium	heart
9	chr14:38358200-38358600	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr14:38358200-38358800	Enhancers	Liver	Liver
11	chr14:38358200-38358800	Enhancers	HepG2	liver
12	chr14:38358400-38358600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr14:38358400-38358600	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr14:38358400-38358600	Enhancers	Colon Smooth Muscle	Colon
15	chr14:38358400-38358600	Bivalent Enhancer	Ovary	ovary
16	chr14:38358400-38358800	Enhancers	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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