| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv530146 |
chr10:15722937-16522747 |
Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv870420 |
chr10:16225427-16541252 |
Flanking Active TSS Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv894904 |
chr10:16233175-16477106 |
Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv3364575 |
chr10:16236995-16272985 |
Enhancers Genic enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv831796 |
chr10:16240111-16393044 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv550018 |
chr10:16244094-16279015 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015