Variant report

Variant	rs536304916
Chromosome Location	chr5:115130847-115130848
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868915	chr5:114723371-115252527	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1021139	chr5:115036724-115131280	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv949677	chr5:115104829-115496168	Enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
4	nsv882734	chr5:115112928-115130906	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3383479	chr5:115129353-115131951	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv2437611	chr5:115129833-115131312	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv5627	chr5:115130202-115131055	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv2177104	chr5:115130265-115130903	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3469766	chr5:115130336-115130895	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv2318507	chr5:115130340-115131015	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3511432	chr5:115130365-115130910	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3511429	chr5:115130379-115130857	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3511431	chr5:115130380-115130901	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv5333	chr5:115130385-115130980	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3469764	chr5:115130391-115130878	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3322092	chr5:115130392-115130881	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3511434	chr5:115130401-115130858	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv3511433	chr5:115130410-115130848	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115130400-115131200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr5:115130400-115131400	Weak transcription	HepG2	liver
3	chr5:115130400-115138400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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