Variant report

Variant	rs536318719
Chromosome Location	chr4:110499057-110499058
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461613	chr4:109922064-110593460	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv595129	chr4:109922064-110593460	Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	esv3349784	chr4:110348873-110723163	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
4	esv2518482	chr4:110497901-110499556	Enhancers Weak transcription Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	esv7767	chr4:110498507-110499319	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2350206	chr4:110498549-110499272	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3465950	chr4:110498625-110499168	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3492897	chr4:110498646-110499156	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3492893	chr4:110498650-110499174	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3492895	chr4:110498669-110499123	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3492899	chr4:110498673-110499102	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3465951	chr4:110498683-110499139	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3492898	chr4:110498684-110499117	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
14	esv3465955	chr4:110498687-110499135	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3465949	chr4:110498691-110499093	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3474	chr4:110498694-110499115	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3492894	chr4:110498703-110499110	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
18	esv3384969	chr4:110498704-110499087	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3465954	chr4:110498724-110499075	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
20	nsv292142	chr4:110498741-110499065	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3492892	chr4:110498741-110499067	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3465956	chr4:110498741-110499083	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3492900	chr4:110498741-110499083	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110484200-110509400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr4:110484400-110509400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:110484400-110509400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:110484400-110509400	Weak transcription	Thymus	Thymus
5	chr4:110490000-110502600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr4:110494800-110499600	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr4:110496200-110500600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr4:110496400-110499600	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr4:110496400-110500000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr4:110496400-110500400	Weak transcription	Fetal Thymus	thymus
11	chr4:110496400-110509000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr4:110496400-110510200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr4:110496600-110499600	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr4:110496600-110503800	Weak transcription	Primary B cells from peripheral blood	blood
15	chr4:110497200-110499600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr4:110497200-110500000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
17	chr4:110497400-110499800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
18	chr4:110497400-110504000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr4:110497800-110501000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr4:110498000-110499600	Weak transcription	Primary T cells from cord blood	blood
21	chr4:110498000-110504400	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr4:110498200-110499200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
23	chr4:110498400-110499600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr4:110498400-110499800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr4:110498600-110499800	Weak transcription	HUVEC	blood vessel

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