Variant report

Variant rs536398907
Chromosome Location chr1:151345799-151345800
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151342400-151345800 Flanking Active TSS Stomach Smooth Muscle stomach
2 chr1:151342400-151346400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:151342400-151346600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:151343200-151346600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
5 chr1:151343600-151346400 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr1:151344000-151346200 Enhancers Fetal Brain Male brain
7 chr1:151345000-151346000 Active TSS Rectal Smooth Muscle rectum
8 chr1:151345200-151345800 Enhancers ES-I3 Cell Line embryonic stem cell
9 chr1:151345200-151345800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:151345200-151346000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:151345200-151346000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:151345200-151346000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr1:151345200-151346000 Enhancers Fetal Lung lung
14 chr1:151345200-151346000 Enhancers Fetal Muscle Leg muscle
15 chr1:151345200-151346000 Enhancers Placenta Placenta
16 chr1:151345200-151346000 Enhancers Left Ventricle heart
17 chr1:151345200-151346000 Enhancers Pancreas Pancrea
18 chr1:151345200-151346000 Enhancers Right Atrium heart
19 chr1:151345200-151346000 Enhancers Spleen Spleen
20 chr1:151345200-151346200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:151345200-151346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:151345200-151346200 Enhancers Liver Liver
23 chr1:151345200-151346200 Enhancers Fetal Heart heart
24 chr1:151345200-151346200 Enhancers Fetal Intestine Large intestine
25 chr1:151345200-151346200 Weak transcription Fetal Thymus thymus
26 chr1:151345200-151346400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:151345200-151346400 Weak transcription Fetal Brain Female brain
28 chr1:151345200-151346600 Enhancers Brain Anterior Caudate brain
29 chr1:151345200-151346600 Enhancers Brain Inferior Temporal Lobe brain
30 chr1:151345200-151346600 Enhancers Esophagus oesophagus
31 chr1:151345200-151347000 Enhancers Brain Germinal Matrix brain
32 chr1:151345200-151347000 Enhancers Brain Hippocampus Middle brain
33 chr1:151345200-151347000 Enhancers Fetal Intestine Small intestine
34 chr1:151345200-151347000 Enhancers Lung lung
35 chr1:151345200-151347000 Enhancers Stomach Mucosa stomach
36 chr1:151345400-151345800 Enhancers H1 Cell Line embryonic stem cell
37 chr1:151345400-151345800 Enhancers HUES48 Cell Line embryonic stem cell
38 chr1:151345400-151345800 Enhancers Ovary ovary
39 chr1:151345400-151345800 Enhancers Psoas Muscle Psoas
40 chr1:151345400-151345800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:151345400-151346000 Enhancers HUES6 Cell Line embryonic stem cell
42 chr1:151345400-151346000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:151345400-151346000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:151345400-151346000 Enhancers Fetal Muscle Trunk muscle
45 chr1:151345400-151346000 Enhancers Right Ventricle heart
46 chr1:151345400-151346000 Enhancers Skeletal Muscle Female skeletal muscle
47 chr1:151345400-151346000 Enhancers Hela-S3 cervix
48 chr1:151345400-151346400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr1:151345400-151346400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:151345400-151346400 Enhancers Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links