Variant report

Variant	rs536410881
Chromosome Location	chr11:36330547-36330548
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:36328951..36330934-chr11:36522654..36524695,2	K562	blood:
2	chr11:36329173..36331205-chr11:36333341..36336022,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	esv3414530	chr11:36330262-36334650	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36311400-36331400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:36319200-36331800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:36322800-36331400	Weak transcription	Gastric	stomach
4	chr11:36323000-36331400	Weak transcription	Lung	lung
5	chr11:36323000-36331400	Weak transcription	Pancreas	Pancrea
6	chr11:36323000-36331400	Weak transcription	Spleen	Spleen
7	chr11:36323000-36333800	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:36323000-36334000	Weak transcription	Ovary	ovary
9	chr11:36323000-36334200	Weak transcription	Brain Anterior Caudate	brain
10	chr11:36323000-36335200	Weak transcription	Colonic Mucosa	Colon
11	chr11:36323800-36331400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr11:36324000-36333800	Weak transcription	Brain Angular Gyrus	brain
13	chr11:36326000-36331200	Weak transcription	Brain Hippocampus Middle	brain
14	chr11:36326400-36331600	Weak transcription	HSMMtube	muscle
15	chr11:36326400-36333800	Weak transcription	Fetal Intestine Small	intestine
16	chr11:36327200-36335200	Weak transcription	Rectal Mucosa Donor 29	rectum
17	chr11:36328400-36330600	Enhancers	Brain Substantia Nigra	brain
18	chr11:36328600-36330800	Enhancers	Adipose Nuclei	Adipose
19	chr11:36329000-36335200	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr11:36329600-36330800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr11:36329600-36332200	Enhancers	Hela-S3	cervix
22	chr11:36329800-36330600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
23	chr11:36329800-36331000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr11:36330000-36335200	Enhancers	HMEC	breast
25	chr11:36330200-36330600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr11:36330200-36330800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr11:36330400-36330600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr11:36330400-36330800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr11:36330400-36333800	Weak transcription	Osteobl	bone

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