Variant report

Variant rs536479409
Chromosome Location chr11:16917879-16917880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16912200-16923600 Weak transcription A549 lung
2 chr11:16912400-16919400 Weak transcription Liver Liver
3 chr11:16913000-16918400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr11:16913800-16921800 Enhancers Fetal Heart heart
5 chr11:16914000-16927400 Weak transcription HSMMtube muscle
6 chr11:16914400-16919200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr11:16914600-16921200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr11:16915400-16918200 Weak transcription Fetal Intestine Large intestine
9 chr11:16915400-16918400 Weak transcription H9 Cell Line embryonic stem cell
10 chr11:16915800-16918000 Weak transcription Right Ventricle heart
11 chr11:16915800-16919000 Weak transcription Right Atrium heart
12 chr11:16915800-16921400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr11:16915800-16921400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr11:16915800-16922800 Weak transcription HMEC breast
15 chr11:16916000-16918400 Weak transcription Pancreas Pancrea
16 chr11:16916000-16918800 Weak transcription Adipose Nuclei Adipose
17 chr11:16916000-16919000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:16916000-16923000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:16916000-16924400 Weak transcription Placenta Amnion Placenta Amnion
20 chr11:16916000-16931000 Weak transcription Spleen Spleen
21 chr11:16916600-16918200 Weak transcription Fetal Intestine Small intestine
22 chr11:16916800-16918000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr11:16916800-16919000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:16916800-16920200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr11:16917000-16918400 Weak transcription Fetal Kidney kidney
26 chr11:16917200-16918400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr11:16917200-16918600 Weak transcription Duodenum Mucosa Duodenum
28 chr11:16917200-16919400 Enhancers Gastric stomach
29 chr11:16917400-16918000 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
30 chr11:16917400-16918200 Enhancers Left Ventricle heart
31 chr11:16917600-16918000 Weak transcription Colonic Mucosa Colon
32 chr11:16917600-16918200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr11:16917600-16918600 Weak transcription Brain Anterior Caudate brain
34 chr11:16917600-16919200 Weak transcription NHDF-Ad bronchial
35 chr11:16917600-16920200 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr11:16917800-16918000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
37 chr11:16917800-16918000 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr11:16917800-16918200 Enhancers Lung lung
39 chr11:16917800-16919200 Enhancers Brain Germinal Matrix brain
40 chr11:16917800-16922000 Enhancers Stomach Mucosa stomach

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