The 2.0 version of rSNPBase

Variant report

Variant rs536500906
Chromosome Location chr5:75786011-75786012
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75769600-75816600 Weak transcription Primary B cells from cord blood blood
2 chr5:75775600-75787600 Weak transcription Gastric stomach
3 chr5:75776200-75787600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr5:75776200-75801000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:75776400-75791200 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr5:75776400-75800200 Weak transcription Primary T cells from cord blood blood
7 chr5:75776800-75791000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr5:75778400-75793200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr5:75780200-75786200 Weak transcription Fetal Intestine Small intestine
10 chr5:75780200-75786200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr5:75780200-75787400 Weak transcription Placenta Placenta
12 chr5:75780400-75788000 Weak transcription Primary T cells fromperipheralblood blood
13 chr5:75780800-75786800 Weak transcription Primary hematopoietic stem cells blood
14 chr5:75780800-75793400 Weak transcription Small Intestine intestine
15 chr5:75781000-75787400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr5:75781200-75786200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:75781600-75786200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr5:75781600-75787600 Weak transcription Colonic Mucosa Colon
19 chr5:75783400-75786200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr5:75783400-75786600 Enhancers H1 Cell Line embryonic stem cell
21 chr5:75783800-75787400 Weak transcription Pancreas Pancrea
22 chr5:75783800-75788200 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr5:75783800-75788800 Enhancers HUES64 Cell Line embryonic stem cell
24 chr5:75784000-75786600 Weak transcription Liver Liver
25 chr5:75784000-75788800 Weak transcription K562 blood
26 chr5:75784000-75791600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr5:75784200-75789200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr5:75784400-75789400 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr5:75784400-75789800 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr5:75784600-75786600 Weak transcription Fetal Stomach stomach
31 chr5:75784600-75788600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr5:75784800-75786800 Enhancers Cortex derived primary cultured neurospheres brain
33 chr5:75784800-75787400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:75785000-75787600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr5:75785000-75787800 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr5:75785400-75786400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr5:75785600-75786200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
38 chr5:75785600-75786400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
39 chr5:75785600-75786400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
40 chr5:75785600-75786400 Enhancers Brain Germinal Matrix brain
41 chr5:75785600-75786800 Enhancers Fetal Lung lung
42 chr5:75785600-75787600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:75785800-75786200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
44 chr5:75785800-75786200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr5:75785800-75786400 Weak transcription H9 Cell Line embryonic stem cell
46 chr5:75785800-75786400 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr5:75785800-75786400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
48 chr5:75785800-75786600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr5:75785800-75786800 Enhancers Primary T killer memory cells from peripheral blood blood
50 chr5:75785800-75787000 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015