Variant report

Variant	rs536525807
Chromosome Location	chr2:181768564-181768565
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875476	chr2:181767757-181854997	Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181763600-181769400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:181767600-181771000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr2:181768200-181769400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr2:181768200-181769400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr2:181768400-181768600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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