Variant report

Variant rs536600536
Chromosome Location chr21:47876081-47876082
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47845600-47877400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr21:47858400-47877400 Weak transcription Stomach Mucosa stomach
3 chr21:47862000-47876800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr21:47862400-47876200 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr21:47863000-47877200 Weak transcription H1 Cell Line embryonic stem cell
6 chr21:47863200-47876600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr21:47863200-47877200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr21:47864600-47877800 Weak transcription Aorta Aorta
9 chr21:47865400-47876200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr21:47866000-47877200 Weak transcription Placenta Amnion Placenta Amnion
11 chr21:47866400-47876200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr21:47869800-47876400 Weak transcription Primary T cells fromperipheralblood blood
13 chr21:47870000-47877200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr21:47870200-47877200 Weak transcription Brain Germinal Matrix brain
15 chr21:47870200-47877400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr21:47870200-47877400 Weak transcription H9 Cell Line embryonic stem cell
17 chr21:47871400-47876200 Strong transcription Primary T cells from cord blood blood
18 chr21:47871800-47877200 Weak transcription Primary hematopoietic stem cells blood
19 chr21:47872200-47876800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr21:47872400-47876600 Weak transcription Primary B cells from cord blood blood
21 chr21:47872800-47877200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr21:47873000-47877200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr21:47873200-47876800 Weak transcription Ovary ovary
24 chr21:47873200-47877000 Weak transcription Fetal Brain Female brain
25 chr21:47873400-47876200 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr21:47873400-47877000 Weak transcription Thymus Thymus
27 chr21:47873400-47877400 Weak transcription Fetal Kidney kidney
28 chr21:47873600-47876200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr21:47873800-47877400 Enhancers Brain Substantia Nigra brain
30 chr21:47874000-47876600 Strong transcription A549 lung
31 chr21:47874000-47876800 Enhancers Psoas Muscle Psoas
32 chr21:47874000-47877200 Enhancers Brain Angular Gyrus brain
33 chr21:47874000-47877200 Enhancers Left Ventricle heart
34 chr21:47874000-47877200 Enhancers Right Ventricle heart
35 chr21:47874000-47877400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr21:47874000-47877400 Enhancers Colon Smooth Muscle Colon
37 chr21:47874000-47877400 Enhancers Right Atrium heart
38 chr21:47874000-47877600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr21:47874200-47876400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr21:47874200-47876400 Genic enhancers Hela-S3 cervix
41 chr21:47874200-47877200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr21:47874200-47877200 Enhancers HMEC breast
43 chr21:47874200-47877400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
44 chr21:47874200-47877400 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr21:47874200-47877400 Enhancers Rectal Smooth Muscle rectum
46 chr21:47874400-47876200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr21:47874400-47877200 Genic enhancers Fetal Muscle Leg muscle
48 chr21:47874600-47877200 Genic enhancers Fetal Muscle Trunk muscle
49 chr21:47874600-47877400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr21:47874600-47877400 Enhancers Adipose Nuclei Adipose

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