Variant report

Variant rs536607
Chromosome Location chr6:13407088-13407089
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13398400-13407400 Weak transcription Placenta Placenta
2 chr6:13401800-13419000 Weak transcription Primary B cells from peripheral blood blood
3 chr6:13403600-13409600 Enhancers Primary monocytes fromperipheralblood blood
4 chr6:13404000-13407400 Enhancers Fetal Heart heart
5 chr6:13404000-13408800 Enhancers Brain Angular Gyrus brain
6 chr6:13404000-13409000 Enhancers Skeletal Muscle Male skeletal muscle
7 chr6:13404200-13407200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:13404400-13407200 Enhancers Brain Inferior Temporal Lobe brain
9 chr6:13404400-13407400 Enhancers A549 lung
10 chr6:13404400-13407800 Enhancers NHLF lung
11 chr6:13404400-13408200 Enhancers Brain Cingulate Gyrus brain
12 chr6:13404400-13408800 Enhancers Adipose Nuclei Adipose
13 chr6:13404400-13408800 Enhancers Left Ventricle heart
14 chr6:13404400-13408800 Enhancers Psoas Muscle Psoas
15 chr6:13404400-13408800 Enhancers Right Atrium heart
16 chr6:13404400-13409000 Enhancers Skeletal Muscle Female skeletal muscle
17 chr6:13404400-13411400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:13404800-13408600 Enhancers Spleen Spleen
19 chr6:13405000-13407200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr6:13405000-13407400 Enhancers Hela-S3 cervix
21 chr6:13405000-13407600 Enhancers Primary neutrophils fromperipheralblood blood
22 chr6:13405000-13410200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:13405000-13418400 Weak transcription Primary hematopoietic stem cells blood
24 chr6:13405000-13421800 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr6:13405200-13407600 Weak transcription NHEK skin
26 chr6:13405200-13408800 Enhancers Brain Anterior Caudate brain
27 chr6:13405400-13407200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr6:13405400-13407200 Weak transcription Osteobl bone
29 chr6:13405400-13407400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr6:13405400-13407400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:13405400-13407400 Weak transcription HSMM muscle
32 chr6:13405400-13407600 Weak transcription Muscle Satellite Cultured Cells --
33 chr6:13405400-13407600 Weak transcription NH-A brain
34 chr6:13405400-13407800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr6:13405400-13409800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:13405400-13410400 Weak transcription Aorta Aorta
37 chr6:13405600-13407600 Enhancers K562 blood
38 chr6:13405600-13408600 Enhancers Fetal Muscle Leg muscle
39 chr6:13405800-13407200 Enhancers Stomach Mucosa stomach
40 chr6:13406000-13408600 Enhancers Duodenum Mucosa Duodenum
41 chr6:13406000-13408800 Enhancers Primary B cells from cord blood blood
42 chr6:13406000-13408800 Enhancers Lung lung
43 chr6:13406000-13408800 Enhancers Right Ventricle heart
44 chr6:13406200-13407200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:13406200-13407200 Flanking Active TSS Liver Liver
46 chr6:13406200-13407200 Weak transcription Rectal Smooth Muscle rectum
47 chr6:13406200-13407800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr6:13406200-13409000 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr6:13406400-13407400 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr6:13406400-13408800 Flanking Active TSS HepG2 liver

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