Variant report

Variant	rs536849594
Chromosome Location	chr7:66397828-66397829
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:66392066..66395575-chr7:66397284..66400489,4	K562	blood:
2	chr7:66109569..66111669-chr7:66397227..66398800,2	K562	blood:
3	chr7:66393271..66394873-chr7:66396881..66398631,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv6642	chr7:66397362-66398006	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3477317	chr7:66397489-66398023	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3477318	chr7:66397489-66398023	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66387600-66407200	Weak transcription	NH-A	brain
2	chr7:66387600-66409800	Weak transcription	Fetal Kidney	kidney
3	chr7:66387600-66428000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:66388200-66406800	Weak transcription	NHLF	lung
5	chr7:66388400-66401200	Weak transcription	Fetal Lung	lung
6	chr7:66388400-66406800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:66388400-66406800	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr7:66388600-66398000	Weak transcription	Placenta	Placenta
9	chr7:66388600-66403600	Weak transcription	HUVEC	blood vessel
10	chr7:66388600-66403800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr7:66388600-66406800	Weak transcription	NHDF-Ad	bronchial
12	chr7:66389000-66406800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr7:66389200-66398200	Weak transcription	Colon Smooth Muscle	Colon
14	chr7:66389200-66398400	Weak transcription	Brain Angular Gyrus	brain
15	chr7:66389400-66405400	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr7:66390200-66398400	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr7:66390600-66398200	Weak transcription	Fetal Brain Female	brain
18	chr7:66390600-66403800	Weak transcription	HSMM	muscle
19	chr7:66391200-66398200	Weak transcription	HSMMtube	muscle
20	chr7:66391200-66409800	Weak transcription	Brain Germinal Matrix	brain
21	chr7:66392600-66403400	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr7:66393000-66399800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr7:66393000-66402400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr7:66393000-66403600	Weak transcription	HepG2	liver
25	chr7:66393000-66406600	Weak transcription	Fetal Muscle Trunk	muscle
26	chr7:66393200-66398000	Weak transcription	Gastric	stomach
27	chr7:66393400-66411800	Weak transcription	Stomach Mucosa	stomach
28	chr7:66393600-66398000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr7:66393600-66398000	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr7:66393800-66422200	Weak transcription	Fetal Heart	heart
31	chr7:66394000-66399400	Weak transcription	GM12878-XiMat	blood
32	chr7:66394000-66403600	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr7:66394200-66398200	Weak transcription	Psoas Muscle	Psoas
34	chr7:66394200-66398400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr7:66394200-66402000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
36	chr7:66394200-66403800	Weak transcription	Hela-S3	cervix
37	chr7:66394200-66405400	Weak transcription	Primary hematopoietic stem cells	blood
38	chr7:66394200-66408000	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr7:66394400-66398200	Weak transcription	Fetal Thymus	thymus
40	chr7:66394400-66405400	Weak transcription	HMEC	breast
41	chr7:66394400-66405600	Weak transcription	Colonic Mucosa	Colon
42	chr7:66395000-66404000	Weak transcription	NHEK	skin
43	chr7:66395400-66404000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr7:66395400-66406800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
45	chr7:66395400-66406800	Weak transcription	Stomach Smooth Muscle	stomach
46	chr7:66395600-66398000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr7:66395600-66398000	Weak transcription	Rectal Smooth Muscle	rectum
48	chr7:66395600-66402400	Weak transcription	Dnd41	blood
49	chr7:66395600-66403600	Weak transcription	A549	lung
50	chr7:66395600-66404600	Weak transcription	Brain Inferior Temporal Lobe	brain

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