Variant report

Variant	rs536862901
Chromosome Location	chr14:67419869-67419870
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3385263	chr14:66514718-67511481	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv525460	chr14:66851185-67626594	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
3	esv1834170	chr14:67103140-67527235	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv2829998	chr14:67103579-67626594	Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	esv1838724	chr14:67232573-67527235	Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv2763071	chr14:67284476-67597237	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv902058	chr14:67310195-67760538	Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
8	nsv902059	chr14:67352226-67760538	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
9	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
10	nsv902060	chr14:67417083-67760538	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
11	nsv902061	chr14:67418872-67482629	Strong transcription Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv499255	chr14:67419863-67419882	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67412200-67425000	Weak transcription	Gastric	stomach
2	chr14:67412200-67425800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:67412600-67426800	Weak transcription	Stomach Mucosa	stomach
4	chr14:67413600-67425000	Weak transcription	Brain Substantia Nigra	brain
5	chr14:67414200-67431800	Weak transcription	Hela-S3	cervix
6	chr14:67414200-67433600	Weak transcription	Brain Angular Gyrus	brain
7	chr14:67414400-67434600	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr14:67414600-67420200	Strong transcription	Liver	Liver
9	chr14:67414600-67420800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:67414600-67421000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr14:67414600-67422600	Weak transcription	Dnd41	blood
12	chr14:67414600-67424400	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr14:67414600-67424400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr14:67414600-67424400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr14:67414600-67424400	Weak transcription	Brain Cingulate Gyrus	brain
16	chr14:67414600-67424400	Weak transcription	Brain Hippocampus Middle	brain
17	chr14:67414600-67424400	Weak transcription	Rectal Smooth Muscle	rectum
18	chr14:67414600-67425000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr14:67414600-67425000	Weak transcription	Fetal Kidney	kidney
20	chr14:67414600-67425000	Weak transcription	Fetal Lung	lung
21	chr14:67414600-67426400	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr14:67414800-67424200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr14:67414800-67426200	Weak transcription	Brain Anterior Caudate	brain
24	chr14:67414800-67443800	Weak transcription	Fetal Stomach	stomach
25	chr14:67414800-67480000	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr14:67415600-67424200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr14:67415600-67439200	Weak transcription	Stomach Smooth Muscle	stomach
28	chr14:67415600-67486400	Weak transcription	Pancreas	Pancrea
29	chr14:67415800-67424200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr14:67415800-67438200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr14:67416200-67425000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr14:67416400-67420800	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr14:67416400-67491200	Weak transcription	Left Ventricle	heart
34	chr14:67418000-67491400	Weak transcription	Ovary	ovary
35	chr14:67419200-67424400	Weak transcription	Duodenum Mucosa	Duodenum
36	chr14:67419200-67424400	Weak transcription	Rectal Mucosa Donor 31	rectum

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