The 2.0 version of rSNPBase

Variant report

Variant rs537001857
Chromosome Location chr11:45906684-45906685
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45893000-45906800 Weak transcription HSMM muscle
2 chr11:45895000-45907200 Weak transcription HUVEC blood vessel
3 chr11:45895400-45906800 Weak transcription NH-A brain
4 chr11:45898600-45906800 Weak transcription H9 Cell Line embryonic stem cell
5 chr11:45898600-45906800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr11:45898800-45906800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:45898800-45907200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr11:45900200-45906800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr11:45901800-45906800 Weak transcription NHEK skin
10 chr11:45902200-45906800 Weak transcription HMEC breast
11 chr11:45902400-45906800 Weak transcription Muscle Satellite Cultured Cells --
12 chr11:45902600-45906800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr11:45902800-45906800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr11:45902800-45907000 Weak transcription Psoas Muscle Psoas
15 chr11:45903200-45907200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr11:45903200-45907200 Weak transcription NHDF-Ad bronchial
17 chr11:45903400-45906800 Weak transcription Placenta Amnion Placenta Amnion
18 chr11:45903400-45906800 Weak transcription A549 lung
19 chr11:45903800-45906800 Weak transcription Aorta Aorta
20 chr11:45903800-45906800 Weak transcription Colonic Mucosa Colon
21 chr11:45903800-45906800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr11:45903800-45906800 Weak transcription K562 blood
23 chr11:45904000-45906800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr11:45904000-45906800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr11:45904000-45906800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr11:45904000-45906800 Weak transcription Brain Anterior Caudate brain
27 chr11:45904000-45906800 Weak transcription Brain Substantia Nigra brain
28 chr11:45904000-45906800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr11:45904000-45906800 Weak transcription NHLF lung
30 chr11:45904200-45906800 Weak transcription Gastric stomach
31 chr11:45904600-45906800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:45904600-45906800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr11:45904600-45906800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr11:45904600-45906800 Weak transcription Esophagus oesophagus
35 chr11:45904600-45906800 Weak transcription Left Ventricle heart
36 chr11:45904600-45906800 Weak transcription Ovary ovary
37 chr11:45904600-45906800 Weak transcription Thymus Thymus
38 chr11:45904800-45906800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr11:45904800-45906800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr11:45905000-45907200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr11:45905200-45906800 Weak transcription Colon Smooth Muscle Colon
42 chr11:45905200-45906800 Weak transcription Fetal Intestine Large intestine
43 chr11:45905400-45906800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr11:45905800-45906800 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr11:45906200-45906800 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
46 chr11:45906200-45906800 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr11:45906200-45906800 Enhancers Liver Liver
48 chr11:45906400-45906800 Enhancers Primary B cells from cord blood blood
49 chr11:45906400-45906800 Enhancers Primary B cells from peripheral blood blood
50 chr11:45906400-45906800 Bivalent Enhancer Primary T cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015