Variant report

Variant	rs537178429
Chromosome Location	chr3:17272171-17272172
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:17269481..17272255-chr3:17272749..17276126,3	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv589841	chr3:17214070-17290465	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv876588	chr3:17214070-17314872	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv876589	chr3:17230884-17346355	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv876590	chr3:17230884-17604963	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv2755406	chr3:17237396-17589896	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv876591	chr3:17246392-17671992	Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	esv3384458	chr3:17272086-17272431	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17221600-17295800	Weak transcription	HSMM	muscle
2	chr3:17244200-17280600	Weak transcription	Rectal Smooth Muscle	rectum
3	chr3:17244600-17274600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr3:17244600-17279400	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr3:17244600-17280600	Weak transcription	Duodenum Mucosa	Duodenum
6	chr3:17244600-17282000	Weak transcription	Gastric	stomach
7	chr3:17244600-17282800	Weak transcription	Pancreas	Pancrea
8	chr3:17244800-17280400	Weak transcription	Fetal Stomach	stomach
9	chr3:17245800-17281200	Weak transcription	Lung	lung
10	chr3:17250000-17330200	Weak transcription	Aorta	Aorta
11	chr3:17254800-17273200	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr3:17254800-17279600	Weak transcription	Ovary	ovary
13	chr3:17255000-17274800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr3:17255000-17297000	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr3:17255200-17278600	Weak transcription	Liver	Liver
16	chr3:17255200-17281000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr3:17255200-17363800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr3:17262000-17278600	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr3:17263200-17274800	Weak transcription	Primary T cells from cord blood	blood
20	chr3:17263200-17274800	Weak transcription	Dnd41	blood
21	chr3:17263200-17279200	Weak transcription	Left Ventricle	heart
22	chr3:17263200-17307200	Weak transcription	Fetal Intestine Small	intestine
23	chr3:17263400-17275800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr3:17264200-17275800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr3:17265200-17274800	Weak transcription	Primary monocytes fromperipheralblood	blood
26	chr3:17267200-17278800	Weak transcription	Fetal Muscle Leg	muscle
27	chr3:17267800-17273200	Weak transcription	Primary B cells from peripheral blood	blood
28	chr3:17268800-17273000	Weak transcription	Primary B cells from cord blood	blood
29	chr3:17269800-17278800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr3:17270000-17273000	Weak transcription	GM12878-XiMat	blood
31	chr3:17271000-17279000	Weak transcription	Primary hematopoietic stem cells	blood
32	chr3:17271600-17273200	Weak transcription	Fetal Heart	heart

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