Variant report

Variant	rs537185135
Chromosome Location	chr11:34079053-34079054
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:34077456..34080361-chr11:34145173..34147972,2	MCF-7	breast:
2	chr11:34078306..34080803-chr11:34146399..34149282,2	K562	blood:
3	chr11:34072006..34079358-chr11:34124269..34129390,19	K562	blood:

Variant related genes	Relation type
ENSG00000135372	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv976485	chr11:34078142-34082109	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34074600-34079200	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
2	chr11:34075400-34087000	Weak transcription	Gastric	stomach
3	chr11:34075400-34094200	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr11:34075400-34094400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr11:34075400-34103800	Weak transcription	Aorta	Aorta
6	chr11:34075600-34079400	Weak transcription	Psoas Muscle	Psoas
7	chr11:34075600-34082600	Enhancers	Primary T helper naive cells from peripheral blood	blood
8	chr11:34075600-34082600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr11:34075600-34082800	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr11:34075600-34088400	Weak transcription	Right Atrium	heart
11	chr11:34075600-34093600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr11:34075600-34100200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr11:34075800-34079600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr11:34075800-34083400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr11:34075800-34093600	Weak transcription	HSMMtube	muscle
16	chr11:34076000-34079200	Genic enhancers	Cortex derived primary cultured neurospheres	brain
17	chr11:34076200-34081400	Strong transcription	HSMM	muscle
18	chr11:34076200-34089400	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr11:34076400-34079200	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
20	chr11:34076400-34079200	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr11:34076400-34079600	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
22	chr11:34076600-34079200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
23	chr11:34076600-34079200	Genic enhancers	HUVEC	blood vessel
24	chr11:34076600-34079600	Enhancers	Fetal Brain Male	brain
25	chr11:34076600-34080200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr11:34076800-34080200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr11:34077000-34100600	Weak transcription	Esophagus	oesophagus
28	chr11:34077200-34079200	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr11:34077200-34079200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr11:34077200-34079200	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr11:34077200-34079200	Enhancers	Brain Anterior Caudate	brain
32	chr11:34077200-34080400	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr11:34077200-34081400	Weak transcription	Lung	lung
34	chr11:34077200-34081600	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
35	chr11:34077200-34081600	Weak transcription	Fetal Muscle Trunk	muscle
36	chr11:34077200-34082800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr11:34077200-34082800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr11:34077200-34082800	Weak transcription	Fetal Stomach	stomach
39	chr11:34077200-34082800	Weak transcription	Left Ventricle	heart
40	chr11:34077200-34082800	Weak transcription	Right Ventricle	heart
41	chr11:34077200-34082800	Weak transcription	Thymus	Thymus
42	chr11:34077200-34083000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr11:34077200-34083000	Weak transcription	Spleen	Spleen
44	chr11:34077200-34084800	Weak transcription	Pancreas	Pancrea
45	chr11:34077200-34087800	Strong transcription	Fetal Thymus	thymus
46	chr11:34077200-34088600	Weak transcription	Ovary	ovary
47	chr11:34077400-34079200	Enhancers	Fetal Lung	lung
48	chr11:34077400-34080200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
49	chr11:34077400-34082600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
50	chr11:34077400-34083200	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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