The 2.0 version of rSNPBase

Variant report

Variant rs537308242
Chromosome Location chr6:12166992-12166993
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12160800-12170800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr6:12161400-12175800 Weak transcription Brain Substantia Nigra brain
3 chr6:12164000-12170600 Weak transcription Brain Anterior Caudate brain
4 chr6:12164000-12173200 Weak transcription NH-A brain
5 chr6:12164200-12169000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:12164200-12174200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:12164200-12174800 Weak transcription HMEC breast
8 chr6:12164400-12167000 Weak transcription K562 blood
9 chr6:12164400-12167400 Weak transcription Fetal Lung lung
10 chr6:12164400-12169000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr6:12164400-12169200 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr6:12164400-12169400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr6:12164400-12169600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr6:12164400-12170400 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr6:12164400-12174800 Weak transcription NHEK skin
16 chr6:12164600-12167000 Weak transcription Pancreas Pancrea
17 chr6:12164600-12167000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr6:12164600-12167200 Weak transcription Primary B cells from peripheral blood blood
19 chr6:12164600-12167600 Weak transcription Left Ventricle heart
20 chr6:12164600-12167800 Weak transcription Brain Angular Gyrus brain
21 chr6:12164600-12168800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr6:12164600-12168800 Weak transcription Aorta Aorta
23 chr6:12164600-12169400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr6:12164600-12170400 Weak transcription H1 Cell Line embryonic stem cell
25 chr6:12164600-12170600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:12164600-12170600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:12164600-12170600 Weak transcription Brain Cingulate Gyrus brain
28 chr6:12164600-12170800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr6:12164600-12170800 Weak transcription Primary monocytes fromperipheralblood blood
30 chr6:12164600-12170800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr6:12164600-12171000 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr6:12164600-12171800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr6:12164600-12172200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:12164600-12172200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr6:12164600-12173800 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr6:12164600-12174000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:12164600-12175800 Weak transcription HSMMtube muscle
38 chr6:12164600-12176000 Weak transcription Gastric stomach
39 chr6:12164800-12167000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr6:12164800-12167200 Weak transcription Primary B cells from cord blood blood
41 chr6:12164800-12167200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:12164800-12167200 Weak transcription Fetal Intestine Large intestine
43 chr6:12164800-12167200 Weak transcription Fetal Muscle Trunk muscle
44 chr6:12164800-12167200 Weak transcription Stomach Smooth Muscle stomach
45 chr6:12164800-12167200 Weak transcription HUVEC blood vessel
46 chr6:12164800-12167600 Weak transcription Fetal Intestine Small intestine
47 chr6:12164800-12167600 Weak transcription Fetal Stomach stomach
48 chr6:12164800-12167600 Weak transcription Thymus Thymus
49 chr6:12164800-12168600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr6:12164800-12168600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015