The 2.0 version of rSNPBase

Variant report

Variant rs537347583
Chromosome Location chr1:213383637-213383638
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:213328200-213387200 Weak transcription Spleen Spleen
3 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
4 chr1:213345600-213404600 Weak transcription Osteobl bone
5 chr1:213346200-213387400 Weak transcription Gastric stomach
6 chr1:213357800-213387200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:213360400-213405200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:213361600-213386600 Weak transcription Aorta Aorta
9 chr1:213362200-213415400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:213368200-213386600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:213368200-213387200 Weak transcription Lung lung
12 chr1:213369600-213388800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:213369800-213398200 Weak transcription Fetal Heart heart
14 chr1:213370800-213427600 Weak transcription Rectal Smooth Muscle rectum
15 chr1:213371000-213389400 Weak transcription Right Ventricle heart
16 chr1:213371600-213385000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:213371600-213385400 Weak transcription NHDF-Ad bronchial
18 chr1:213371800-213386000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:213371800-213387200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:213371800-213388800 Weak transcription HepG2 liver
21 chr1:213371800-213390000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:213372000-213389800 Weak transcription Brain Hippocampus Middle brain
23 chr1:213372000-213393200 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr1:213372000-213405200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:213372600-213390200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:213372600-213413800 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:213372800-213387200 Weak transcription Liver Liver
28 chr1:213372800-213414000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:213373000-213385200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:213373000-213386000 Weak transcription Fetal Muscle Trunk muscle
31 chr1:213373000-213398000 Weak transcription Colon Smooth Muscle Colon
32 chr1:213373000-213405200 Weak transcription Left Ventricle heart
33 chr1:213373000-213414200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr1:213373000-213423000 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:213373200-213385600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:213373200-213386600 Weak transcription Dnd41 blood
37 chr1:213373200-213405000 Weak transcription Primary T cells fromperipheralblood blood
38 chr1:213373200-213417000 Weak transcription Primary B cells from peripheral blood blood
39 chr1:213374200-213385600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:213374400-213385200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:213374400-213385600 Weak transcription Fetal Brain Female brain
42 chr1:213374400-213386600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:213375200-213390400 Weak transcription HSMMtube muscle
44 chr1:213375400-213388600 Weak transcription HMEC breast
45 chr1:213375800-213405200 Weak transcription Psoas Muscle Psoas
46 chr1:213375800-213405200 Weak transcription HSMM muscle
47 chr1:213376000-213387200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:213376000-213387200 Weak transcription Esophagus oesophagus
49 chr1:213376000-213387200 Weak transcription Fetal Intestine Large intestine
50 chr1:213376000-213387200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015