The 2.0 version of rSNPBase

Variant report

Variant rs537407896
Chromosome Location chr1:67018063-67018064
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67009000-67019600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:67009600-67018200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:67009600-67019600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:67009800-67028200 Weak transcription Brain Germinal Matrix brain
9 chr1:67010000-67018600 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:67010000-67018600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:67010000-67029000 Weak transcription Fetal Kidney kidney
12 chr1:67010800-67018600 Weak transcription Osteobl bone
13 chr1:67011000-67028000 Weak transcription HUVEC blood vessel
14 chr1:67011200-67021800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:67011200-67022000 Weak transcription Pancreas Pancrea
16 chr1:67011800-67029800 Weak transcription Fetal Brain Male brain
17 chr1:67012400-67021400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:67013400-67018600 Weak transcription Brain Cingulate Gyrus brain
19 chr1:67013800-67021200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:67014600-67018200 Weak transcription Brain Angular Gyrus brain
21 chr1:67015800-67021600 Weak transcription Brain Anterior Caudate brain
22 chr1:67016400-67018200 Weak transcription NH-A brain
23 chr1:67017400-67023800 Enhancers Fetal Heart heart
24 chr1:67017600-67019000 Enhancers Adipose Nuclei Adipose
25 chr1:67017600-67019800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:67017600-67020200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:67017800-67018400 Enhancers Brain Hippocampus Middle brain
28 chr1:67017800-67018600 Enhancers NHDF-Ad bronchial
29 chr1:67017800-67018800 Enhancers Left Ventricle heart
30 chr1:67017800-67019000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:67017800-67019000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:67017800-67019000 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:67017800-67019200 Enhancers Fetal Thymus thymus
34 chr1:67017800-67022400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:67018000-67018200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:67018000-67018200 Flanking Active TSS Aorta Aorta
37 chr1:67018000-67018200 Enhancers HepG2 liver
38 chr1:67018000-67018800 Enhancers H1 Cell Line embryonic stem cell
39 chr1:67018000-67018800 Enhancers HUES48 Cell Line embryonic stem cell
40 chr1:67018000-67018800 Enhancers Fetal Muscle Leg muscle
41 chr1:67018000-67018800 Enhancers Gastric stomach
42 chr1:67018000-67018800 Enhancers Lung lung
43 chr1:67018000-67019000 Enhancers HUES6 Cell Line embryonic stem cell
44 chr1:67018000-67019000 Enhancers Primary T cells from cord blood blood
45 chr1:67018000-67019200 Enhancers Cortex derived primary cultured neurospheres brain
46 chr1:67018000-67019200 Enhancers Brain Substantia Nigra brain
47 chr1:67018000-67019200 Enhancers Fetal Lung lung
48 chr1:67018000-67020200 Enhancers NHLF lung
49 chr1:67018000-67023800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015