Variant report

Variant	rs537451592
Chromosome Location	chr10:23635540-23635541
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA3	chr10:23634523-23635555	SK-N-SH	brain:	n/a	n/a

Variant related genes	Relation type
C10orf67	TF binding region

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2337865	chr10:23635321-23635821	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
2	esv3314086	chr10:23635403-23635795	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
3	esv3385118	chr10:23635404-23635702	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
4	esv3314097	chr10:23635411-23635695	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
5	esv3352029	chr10:23635434-23635671	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
6	esv20282	chr10:23635447-23636434	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
7	esv3314108	chr10:23635477-23635629	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
8	esv3507706	chr10:23635489-23635626	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
9	esv2503774	chr10:23635493-23635621	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
10	esv3314119	chr10:23635493-23635624	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
11	esv3507707	chr10:23635493-23635624	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
12	nsv550214	chr10:23635507-23635612	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23633800-23635800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:23633800-23636400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr10:23633800-23636400	Weak transcription	Aorta	Aorta
4	chr10:23633800-23636400	Weak transcription	Ovary	ovary
5	chr10:23633800-23636400	Weak transcription	Psoas Muscle	Psoas
6	chr10:23633800-23636600	Weak transcription	Left Ventricle	heart
7	chr10:23633800-23636600	Enhancers	Hela-S3	cervix
8	chr10:23633800-23637400	Enhancers	Fetal Heart	heart
9	chr10:23633800-23638000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:23633800-23640400	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr10:23633800-23640600	Weak transcription	Placenta	Placenta
12	chr10:23633800-23641000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:23634000-23635600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:23634000-23635600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr10:23634000-23635600	Enhancers	HMEC	breast
16	chr10:23634000-23635600	Enhancers	NHEK	skin
17	chr10:23634000-23635600	Enhancers	Osteobl	bone
18	chr10:23634000-23636400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr10:23634000-23636400	Enhancers	Brain Hippocampus Middle	brain
20	chr10:23634000-23636600	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr10:23634400-23635600	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr10:23634400-23641000	Weak transcription	HSMMtube	muscle
23	chr10:23634600-23636400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr10:23634600-23636800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr10:23634600-23640200	Weak transcription	NHLF	lung
26	chr10:23635200-23636200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr10:23635200-23636200	Weak transcription	Brain Anterior Caudate	brain
28	chr10:23635200-23636200	Weak transcription	Brain Cingulate Gyrus	brain
29	chr10:23635200-23636600	Weak transcription	HSMM	muscle
30	chr10:23635200-23637200	Enhancers	Skeletal Muscle Male	skeletal muscle
31	chr10:23635200-23640600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr10:23635200-23643800	Weak transcription	Fetal Kidney	kidney
33	chr10:23635400-23636400	Weak transcription	Brain Angular Gyrus	brain
34	chr10:23635400-23636400	Weak transcription	NH-A	brain
35	chr10:23635400-23637000	Enhancers	HepG2	liver
36	chr10:23635400-23640000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr10:23635400-23640600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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