Variant report

Variant	rs537782539
Chromosome Location	chr2:231493197-231493198
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875955	chr2:231440555-231500805	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv527319	chr2:231492816-231501467	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:231472800-231497200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:231492400-231493400	Enhancers	Primary T cells fromperipheralblood	blood
3	chr2:231492400-231493400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr2:231492600-231493200	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr2:231492600-231493200	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr2:231492600-231493200	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr2:231492600-231493400	Enhancers	Esophagus	oesophagus
8	chr2:231492600-231493400	Enhancers	Fetal Heart	heart
9	chr2:231492600-231493400	Enhancers	Pancreas	Pancrea
10	chr2:231492600-231493400	Enhancers	Sigmoid Colon	Sigmoid Colon
11	chr2:231492600-231493400	Flanking Active TSS	K562	blood
12	chr2:231492800-231493200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr2:231492800-231493200	Enhancers	Primary T cells from cord blood	blood
14	chr2:231492800-231493200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr2:231492800-231493200	Enhancers	Fetal Thymus	thymus
16	chr2:231492800-231493200	Enhancers	A549	lung
17	chr2:231492800-231493200	Enhancers	Hela-S3	cervix
18	chr2:231492800-231493200	Bivalent Enhancer	HepG2	liver
19	chr2:231492800-231493200	Enhancers	HSMMtube	muscle
20	chr2:231492800-231493200	Enhancers	NH-A	brain
21	chr2:231492800-231493400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr2:231492800-231493400	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr2:231492800-231493400	Enhancers	NHDF-Ad	bronchial
24	chr2:231492800-231493400	Enhancers	NHLF	lung
25	chr2:231492800-231493600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr2:231492800-231493600	Enhancers	Fetal Lung	lung
27	chr2:231492800-231493600	Enhancers	Stomach Mucosa	stomach
28	chr2:231492800-231494200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr2:231493000-231493200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr2:231493000-231493200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr2:231493000-231494200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr2:231493000-231494400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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