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Variant report
Variant
rs537880
Chromosome Location
chr5:94459134-94459135
allele
G/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr5:94457518..94459847-chr5:94460973..94464173,3
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 4 )
Associated traits (count: 1 )
rSNPs within LD-proxies of this variant (count:3)
rs_ID
r
2
[population]
rs13169763
0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6556859
0.85[CHB][hapmap]
rs6894476
0.90[CHB][hapmap];0.87[GIH][hapmap];0.87[JPT][hapmap]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv830407
chr5:94447530-94495329
Enhancers Weak transcription Active TSS Flanking Active TSS
Chromatin interactive region
1 gene(s)
inside rSNPs
diseases
mRNA abundance (count:1)
SNP
Gene
Cis/trans
Tissue
Source
rs537880
FAM81B
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links