Variant report

Variant	rs537939902
Chromosome Location	chr11:63377870-63377871
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:63376691..63378525-chr11:63379953..63383001,3	K562	blood:

Variant related genes	Relation type
ENSG00000176485	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	esv32927	chr11:63377277-63387923	Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63356800-63381000	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr11:63357600-63380400	Weak transcription	NHLF	lung
3	chr11:63362000-63378000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr11:63371000-63380400	Weak transcription	Aorta	Aorta
5	chr11:63374000-63378200	Enhancers	Placenta	Placenta
6	chr11:63374600-63380200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr11:63374800-63378400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:63374800-63380400	Weak transcription	K562	blood
9	chr11:63375000-63378600	Enhancers	NH-A	brain
10	chr11:63375600-63378400	Enhancers	HMEC	breast
11	chr11:63375600-63378400	Enhancers	HSMM	muscle
12	chr11:63375800-63378000	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr11:63375800-63378200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr11:63375800-63378200	Enhancers	Duodenum Mucosa	Duodenum
15	chr11:63375800-63378400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr11:63375800-63378800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr11:63375800-63380200	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr11:63375800-63380400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr11:63376200-63378000	Enhancers	Placenta Amnion	Placenta Amnion
20	chr11:63376200-63378000	Enhancers	HUVEC	blood vessel
21	chr11:63376200-63378400	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr11:63376200-63378600	Enhancers	Small Intestine	intestine
23	chr11:63376200-63378600	Enhancers	Stomach Mucosa	stomach
24	chr11:63376200-63379200	Enhancers	H1 Cell Line	embryonic stem cell
25	chr11:63376400-63378200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
26	chr11:63376400-63378400	Enhancers	Right Ventricle	heart
27	chr11:63376400-63378600	Flanking Active TSS	Brain Substantia Nigra	brain
28	chr11:63376400-63379400	Flanking Active TSS	Brain Cingulate Gyrus	brain
29	chr11:63376600-63378000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
30	chr11:63376600-63378000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr11:63376600-63378000	Enhancers	Muscle Satellite Cultured Cells	--
32	chr11:63376600-63378200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr11:63376600-63378200	Enhancers	Lung	lung
34	chr11:63376600-63378200	Enhancers	Rectal Smooth Muscle	rectum
35	chr11:63376600-63378400	Flanking Active TSS	Brain Hippocampus Middle	brain
36	chr11:63376600-63378400	Enhancers	Colonic Mucosa	Colon
37	chr11:63376600-63379400	Flanking Active TSS	Adipose Nuclei	Adipose
38	chr11:63376800-63378000	Flanking Active TSS	Liver	Liver
39	chr11:63376800-63378000	Enhancers	Pancreas	Pancrea
40	chr11:63376800-63378000	Enhancers	Rectal Mucosa Donor 31	rectum
41	chr11:63376800-63378000	Enhancers	Stomach Smooth Muscle	stomach
42	chr11:63376800-63378400	Enhancers	Psoas Muscle	Psoas
43	chr11:63376800-63378600	Enhancers	Fetal Muscle Leg	muscle
44	chr11:63376800-63378600	Enhancers	Left Ventricle	heart
45	chr11:63376800-63378600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr11:63376800-63378800	Enhancers	Fetal Muscle Trunk	muscle
47	chr11:63376800-63380400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr11:63376800-63380400	Enhancers	A549	lung
49	chr11:63377000-63378000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr11:63377000-63378000	Enhancers	Monocytes-CD14+_RO01746	blood

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