Variant report

Variant	rs538007274
Chromosome Location	chr16:65212400-65212401
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833260	chr16:65050647-65218759	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv34131	chr16:65137094-65379496	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv431508	chr16:65211408-65223172	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
4	nsv431509	chr16:65211408-65302840	Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:65210000-65212400	Enhancers	NHLF	lung
2	chr16:65210000-65215600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr16:65210200-65212400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr16:65210200-65212600	Enhancers	Osteobl	bone
5	chr16:65210400-65212400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr16:65210400-65212600	Enhancers	NHDF-Ad	bronchial
7	chr16:65210400-65212800	Enhancers	Muscle Satellite Cultured Cells	--
8	chr16:65210400-65213000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr16:65210400-65213000	Enhancers	NH-A	brain
10	chr16:65211000-65215800	Weak transcription	Fetal Kidney	kidney
11	chr16:65211200-65214600	Weak transcription	Adipose Nuclei	Adipose
12	chr16:65211200-65214800	Weak transcription	HSMMtube	muscle
13	chr16:65211800-65212400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr16:65211800-65212400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr16:65211800-65214600	Weak transcription	Fetal Muscle Leg	muscle
16	chr16:65212000-65212400	Weak transcription	Fetal Stomach	stomach
17	chr16:65212000-65212400	Enhancers	Ovary	ovary
18	chr16:65212000-65215600	Weak transcription	HSMM	muscle
19	chr16:65212200-65212400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr16:65212200-65212600	Enhancers	Fetal Lung	lung
21	chr16:65212400-65212600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr16:65212400-65212600	Enhancers	Fetal Stomach	stomach
23	chr16:65212400-65214600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr16:65212400-65214600	Weak transcription	Ovary	ovary
25	chr16:65212400-65215200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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