Variant report

Variant rs538142852
Chromosome Location chr10:93224094-93224095
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93184400-93226400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr10:93186000-93226800 Weak transcription Pancreas Pancrea
3 chr10:93213200-93224200 Weak transcription Aorta Aorta
4 chr10:93214200-93272000 Weak transcription HUVEC blood vessel
5 chr10:93218000-93224200 Weak transcription Left Ventricle heart
6 chr10:93218000-93230600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr10:93218200-93224200 Weak transcription Esophagus oesophagus
8 chr10:93218600-93228200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr10:93219600-93224200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr10:93219600-93247600 Weak transcription HSMMtube muscle
11 chr10:93219800-93224200 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr10:93219800-93224200 Strong transcription Adipose Nuclei Adipose
13 chr10:93220000-93224200 Weak transcription Fetal Intestine Small intestine
14 chr10:93220200-93224800 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr10:93220200-93225000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr10:93220200-93225000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr10:93220200-93226200 Weak transcription Stomach Smooth Muscle stomach
18 chr10:93220200-93226800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr10:93220400-93224200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr10:93220600-93226600 Weak transcription NHLF lung
21 chr10:93220600-93226800 Weak transcription A549 lung
22 chr10:93220600-93271400 Weak transcription HMEC breast
23 chr10:93220800-93229200 Weak transcription Duodenum Mucosa Duodenum
24 chr10:93220800-93248200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr10:93220800-93259400 Weak transcription Primary T cells from cord blood blood
26 chr10:93221000-93226600 Weak transcription Rectal Smooth Muscle rectum
27 chr10:93221000-93228800 Weak transcription Primary B cells from cord blood blood
28 chr10:93221600-93224400 Weak transcription Fetal Stomach stomach
29 chr10:93221800-93224400 Weak transcription Primary hematopoietic stem cells blood
30 chr10:93221800-93224800 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr10:93221800-93225000 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr10:93221800-93225200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr10:93221800-93225400 Strong transcription HSMM muscle
34 chr10:93221800-93226600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr10:93222000-93225200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr10:93222200-93224200 Strong transcription iPS-18 Cell Line embryonic stem cell
37 chr10:93222200-93224200 Strong transcription Colon Smooth Muscle Colon
38 chr10:93222200-93226000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr10:93222200-93228000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr10:93222400-93224200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr10:93222400-93224200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr10:93222400-93224600 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr10:93222400-93225000 Weak transcription Brain Hippocampus Middle brain
44 chr10:93222400-93225200 Strong transcription Dnd41 blood
45 chr10:93222400-93226400 Weak transcription Brain Cingulate Gyrus brain
46 chr10:93222400-93228200 Strong transcription Fetal Brain Male brain
47 chr10:93222400-93230400 Weak transcription Placenta Amnion Placenta Amnion
48 chr10:93222600-93224200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr10:93222600-93226800 Weak transcription Gastric stomach
50 chr10:93222600-93226800 Weak transcription Thymus Thymus

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