Variant report

Variant	rs538145807
Chromosome Location	chr11:102488244-102488245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1815657	chr11:102413582-102490794	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv832252	chr11:102445479-102627879	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1037454	chr11:102487521-102601233	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv541156	chr11:102487521-102601233	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	esv33621	chr11:102488155-102489121	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102484200-102488600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr11:102484200-102491200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:102484400-102488400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr11:102485600-102490800	Weak transcription	Fetal Intestine Large	intestine
5	chr11:102485600-102492800	Weak transcription	Fetal Intestine Small	intestine
6	chr11:102486200-102488600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:102486400-102488400	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr11:102486400-102488600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr11:102486600-102491600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr11:102487000-102488600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr11:102487000-102489200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr11:102487000-102491200	Weak transcription	HUVEC	blood vessel
13	chr11:102487000-102494800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr11:102487000-102497000	Weak transcription	HSMMtube	muscle
15	chr11:102487200-102491400	Weak transcription	A549	lung
16	chr11:102487800-102491600	Weak transcription	HepG2	liver
17	chr11:102488200-102488400	Enhancers	H1 Cell Line	embryonic stem cell
18	chr11:102488200-102488600	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr11:102488200-102488600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr11:102488200-102488600	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr11:102488200-102488800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr11:102488200-102488800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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