Variant report

Variant	rs538161745
Chromosome Location	chr6:72163163-72163164
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830684	chr6:72094842-72282684	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	488 gene(s)	inside rSNPs	diseases
2	esv3339257	chr6:72163131-72166329	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72156000-72167400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:72162200-72163400	Enhancers	Fetal Lung	lung
3	chr6:72162400-72163200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr6:72162400-72163200	Enhancers	Fetal Brain Female	brain
5	chr6:72162400-72163200	Enhancers	Fetal Stomach	stomach
6	chr6:72162600-72163400	Enhancers	Rectal Smooth Muscle	rectum
7	chr6:72162600-72167400	Weak transcription	HSMMtube	muscle
8	chr6:72162800-72170400	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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