Variant report

Variant rs538209402
Chromosome Location chr10:42862834-42862835
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:42859000-42863600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
2 chr10:42860400-42863800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
3 chr10:42860600-42863400 Active TSS iPS-15b Cell Line embryonic stem cell
4 chr10:42860600-42863600 ZNF genes & repeats H1 Cell Line embryonic stem cell
5 chr10:42861600-42863600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr10:42861600-42863600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
7 chr10:42861600-42863600 ZNF genes & repeats Fetal Stomach stomach
8 chr10:42861800-42863800 Active TSS K562 blood
9 chr10:42862000-42863400 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr10:42862000-42863400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr10:42862000-42863600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr10:42862000-42863600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr10:42862000-42863600 ZNF genes & repeats Pancreas Pancrea
14 chr10:42862000-42863800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr10:42862000-42864200 Active TSS Stomach Smooth Muscle stomach
16 chr10:42862200-42863600 Active TSS HMEC breast
17 chr10:42862200-42863800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr10:42862200-42863800 Active TSS HUES64 Cell Line embryonic stem cell
19 chr10:42862400-42863000 Active TSS Fetal Adrenal Gland Adrenal Gland
20 chr10:42862400-42863000 Active TSS Fetal Brain Female brain
21 chr10:42862400-42863600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr10:42862400-42863600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr10:42862400-42863600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr10:42862400-42863800 Active TSS Ovary ovary
25 chr10:42862600-42863000 Active TSS Primary hematopoietic stem cells short term culture blood
26 chr10:42862600-42863000 Active TSS Adipose Nuclei Adipose
27 chr10:42862600-42863400 Active TSS Duodenum Mucosa Duodenum
28 chr10:42862600-42863400 Active TSS Lung lung
29 chr10:42862600-42863400 Active TSS Rectal Smooth Muscle rectum
30 chr10:42862600-42863400 Active TSS Spleen Spleen
31 chr10:42862600-42863600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr10:42862600-42863600 Active TSS Breast Myoepithelial Primary Cells Breast
33 chr10:42862600-42863600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
34 chr10:42862600-42863600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr10:42862600-42863600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
36 chr10:42862600-42863600 Active TSS Brain Angular Gyrus brain
37 chr10:42862600-42863600 Active TSS Brain Cingulate Gyrus brain
38 chr10:42862600-42863600 ZNF genes & repeats Brain Germinal Matrix brain
39 chr10:42862600-42863600 Active TSS Brain Hippocampus Middle brain
40 chr10:42862600-42863600 Active TSS Brain Inferior Temporal Lobe brain
41 chr10:42862600-42863600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr10:42862600-42863600 Active TSS Colonic Mucosa Colon
43 chr10:42862600-42863600 Active TSS Colon Smooth Muscle Colon
44 chr10:42862600-42863600 Active TSS Duodenum Smooth Muscle Duodenum
45 chr10:42862600-42863600 Active TSS Esophagus oesophagus
46 chr10:42862600-42863600 Active TSS Fetal Intestine Large intestine
47 chr10:42862600-42863600 ZNF genes & repeats Fetal Intestine Small intestine
48 chr10:42862600-42863600 Active TSS Fetal Kidney kidney
49 chr10:42862600-42863600 ZNF genes & repeats Fetal Muscle Leg muscle
50 chr10:42862600-42863600 ZNF genes & repeats Placenta Placenta

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