Variant report

Variant rs538325
Chromosome Location chr1:144950190-144950191
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144939800-144952200 Strong transcription K562 blood
2 chr1:144941600-144951000 Strong transcription Left Ventricle heart
3 chr1:144942200-144960200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:144942400-144951400 Strong transcription Brain Cingulate Gyrus brain
5 chr1:144942400-144952200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:144942600-144952000 Strong transcription Osteobl bone
7 chr1:144942600-144952200 Strong transcription Placenta Placenta
8 chr1:144942800-144951800 Strong transcription HSMM muscle
9 chr1:144942800-144952200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:144942800-144952200 Strong transcription Muscle Satellite Cultured Cells --
11 chr1:144942800-144952200 Strong transcription HSMMtube muscle
12 chr1:144943200-144953000 Weak transcription Fetal Brain Female brain
13 chr1:144943400-144961000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:144944000-144950600 Weak transcription Lung lung
15 chr1:144944000-144966200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:144945600-144950200 Strong transcription Psoas Muscle Psoas
17 chr1:144945800-144952200 Strong transcription Adipose Nuclei Adipose
18 chr1:144946600-144964800 Weak transcription HMEC breast
19 chr1:144946800-144950400 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:144946800-144950800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:144946800-144962800 Weak transcription Liver Liver
22 chr1:144946800-144966200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:144947400-144952400 Strong transcription Skeletal Muscle Male skeletal muscle
24 chr1:144947400-144956400 Weak transcription Stomach Smooth Muscle stomach
25 chr1:144947400-144972800 Weak transcription Right Ventricle heart
26 chr1:144948400-144951600 Weak transcription Fetal Brain Male brain
27 chr1:144949000-144952200 Strong transcription Skeletal Muscle Female skeletal muscle
28 chr1:144949000-144964800 Weak transcription Brain Angular Gyrus brain
29 chr1:144949000-144964800 Weak transcription Brain Hippocampus Middle brain
30 chr1:144949000-144964800 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:144949200-144950200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:144949200-144950400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:144949200-144950400 Weak transcription Fetal Heart heart
34 chr1:144949200-144950800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:144949200-144950800 Weak transcription Fetal Muscle Leg muscle
36 chr1:144949200-144951200 Weak transcription Fetal Muscle Trunk muscle
37 chr1:144949200-144951400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:144949200-144953000 Weak transcription NH-A brain
39 chr1:144949200-144953600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:144949200-144954400 Weak transcription GM12878-XiMat blood
41 chr1:144949200-144954800 Weak transcription NHDF-Ad bronchial
42 chr1:144949200-144964800 Weak transcription Brain Anterior Caudate brain
43 chr1:144949200-144964800 Weak transcription Brain Substantia Nigra brain
44 chr1:144949200-144966200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:144949200-144966200 Weak transcription Brain Germinal Matrix brain
46 chr1:144949200-144972400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:144949400-144950800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:144949400-144962800 Weak transcription Primary B cells from peripheral blood blood
49 chr1:144949600-144954400 Weak transcription Primary B cells from cord blood blood
50 chr1:144950000-144950200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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