Variant report

Variant rs538375895
Chromosome Location chr6:5784021-5784022
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5753000-5786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr6:5772800-5786800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:5774400-5787400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr6:5776400-5786800 Weak transcription Thymus Thymus
5 chr6:5779200-5787200 Weak transcription Primary B cells from cord blood blood
6 chr6:5779600-5786600 Weak transcription Primary T cells from cord blood blood
7 chr6:5781200-5784400 Enhancers Fetal Muscle Leg muscle
8 chr6:5781400-5784200 Enhancers Fetal Muscle Trunk muscle
9 chr6:5781600-5788000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:5781800-5786800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr6:5782000-5784400 Enhancers Fetal Intestine Large intestine
12 chr6:5782200-5784200 Enhancers Fetal Heart heart
13 chr6:5782200-5788200 Enhancers Fetal Thymus thymus
14 chr6:5782400-5784200 Enhancers Right Ventricle heart
15 chr6:5782400-5785000 Enhancers HUES6 Cell Line embryonic stem cell
16 chr6:5782600-5784200 Enhancers Colonic Mucosa Colon
17 chr6:5782600-5784200 Enhancers Fetal Brain Male brain
18 chr6:5782600-5784200 Enhancers Fetal Intestine Small intestine
19 chr6:5782600-5787600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:5782800-5784200 Enhancers Cortex derived primary cultured neurospheres brain
21 chr6:5782800-5784200 Weak transcription Small Intestine intestine
22 chr6:5782800-5784400 Enhancers Placenta Placenta
23 chr6:5782800-5784800 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr6:5783200-5784200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:5783400-5784200 Enhancers Stomach Smooth Muscle stomach
26 chr6:5783400-5785000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr6:5783600-5784800 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr6:5783600-5786400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr6:5783600-5786800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr6:5783600-5787400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr6:5783800-5784400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr6:5783800-5784400 Enhancers Rectal Mucosa Donor 29 rectum
33 chr6:5783800-5785000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:5783800-5785800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr6:5783800-5786400 Weak transcription Brain Germinal Matrix brain
36 chr6:5783800-5787000 Weak transcription H1 Cell Line embryonic stem cell
37 chr6:5783800-5787000 Weak transcription Left Ventricle heart
38 chr6:5783800-5794600 Weak transcription Psoas Muscle Psoas
39 chr6:5784000-5784200 Enhancers Right Atrium heart
40 chr6:5784000-5784400 Enhancers Rectal Mucosa Donor 31 rectum
41 chr6:5784000-5784800 Enhancers Duodenum Mucosa Duodenum
42 chr6:5784000-5785400 Weak transcription Fetal Brain Female brain

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