Variant report

Variant	rs538437019
Chromosome Location	chr1:59197687-59197688
allele	-/GG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:59196730..59199311-chr1:59246080..59248881,2	K562	blood:
2	chr1:59194152..59196031-chr1:59196369..59198347,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3438149	chr1:59194264-59197912	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv2754829	chr1:59197556-59215791	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59192600-59204200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr1:59193600-59197800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:59193600-59200200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:59194400-59197800	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr1:59197200-59198800	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr1:59197400-59198200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr1:59197400-59198400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr1:59197400-59198400	Enhancers	NHEK	skin
9	chr1:59197400-59198600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr1:59197400-59198600	Enhancers	Osteobl	bone
11	chr1:59197400-59198800	Enhancers	Rectal Smooth Muscle	rectum
12	chr1:59197600-59198000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr1:59197600-59198200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:59197600-59198200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr1:59197600-59198200	Enhancers	HMEC	breast
16	chr1:59197600-59198400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr1:59197600-59198400	Enhancers	Muscle Satellite Cultured Cells	--
18	chr1:59197600-59198400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr1:59197600-59198400	Enhancers	Aorta	Aorta
20	chr1:59197600-59198400	Enhancers	Colon Smooth Muscle	Colon
21	chr1:59197600-59198400	Enhancers	Gastric	stomach
22	chr1:59197600-59198400	Enhancers	Ovary	ovary
23	chr1:59197600-59198400	Enhancers	NHDF-Ad	bronchial

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