Variant report

Variant	rs538490171
Chromosome Location	chr22:23412437-23412438
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPD	chr22:23412200-23412521	HepG2	liver:	n/a	n/a
2	ZNF143	chr22:23411976-23412458	K562	blood:	n/a	chr22:23412262-23412272
3	CTCF	chr22:23411997-23413141	K562	blood:	n/a	chr22:23413008-23413021 chr22:23412210-23412223 chr22:23413010-23413023
4	USF1	chr22:23412226-23412459	SK-N-SH_RA	brain:	n/a	chr22:23412312-23412328
5	MYC	chr22:23411966-23412756	K562	blood:	n/a	chr22:23412636-23412645
6	TAF1	chr22:23412021-23412517	ECC-1	luminal epithelium:	n/a	n/a
7	EBF1	chr22:23412202-23412611	GM12878	blood:	n/a	n/a
8	HMGN3	chr22:23411750-23413315	K562	blood:	n/a	n/a
9	MAX	chr22:23412141-23412848	K562	blood:	n/a	chr22:23412636-23412645
10	SP1	chr22:23412081-23412523	GM12878	blood:	n/a	chr22:23412308-23412319 chr22:23412308-23412320 chr22:23412309-23412319 chr22:23412309-23412318 chr22:23412310-23412319 chr22:23412309-23412318 chr22:23412308-23412320
11	NFYA	chr22:23412061-23412455	GM12878	blood:	n/a	n/a
12	CTCF	chr22:23412437-23412517	H1-hESC	embryonic stem cell:	n/a	n/a
13	SP1	chr22:23411986-23412537	HCT-116	colon:	n/a	chr22:23412308-23412319 chr22:23412308-23412320 chr22:23412309-23412319 chr22:23412309-23412318 chr22:23412310-23412319 chr22:23412309-23412318 chr22:23412308-23412320
14	MAX	chr22:23411986-23412698	A549	lung:	n/a	chr22:23412636-23412645
15	E2F6	chr22:23411827-23413015	K562	blood:	n/a	chr22:23411896-23411906 chr22:23412262-23412271 chr22:23411888-23411897
16	HCFC1	chr22:23411796-23412516	Hela-S3	cervix:	n/a	n/a
17	MYC	chr22:23411944-23412805	K562	blood:	n/a	chr22:23412636-23412645
18	MAZ	chr22:23412021-23412776	Hela-S3	cervix:	n/a	chr22:23412636-23412645
19	NFYB	chr22:23411869-23412518	Hela-S3	cervix:	n/a	n/a
20	CTCF	chr22:23412380-23412530	GM12866	blood:	n/a	n/a
21	CBX3	chr22:23411343-23412481	K562	blood:	n/a	n/a
22	MAX	chr22:23411856-23412511	K562	blood:	n/a	chr22:23411886-23411896 chr22:23411889-23411899
23	CTCFL	chr22:23412210-23412594	K562	blood:	n/a	n/a
24	MAX	chr22:23412214-23412529	GM12878	blood:	n/a	n/a
25	NR2F2	chr22:23411579-23413017	K562	blood:	n/a	n/a
26	POLR2A	chr22:23411969-23412972	H1-neurons	neurons:	n/a	n/a
27	MYC	chr22:23412375-23412479	MCF10A-Er-Src	breast:	n/a	n/a
28	SP1	chr22:23412089-23412447	HepG2	liver:	n/a	chr22:23412308-23412319 chr22:23412308-23412320 chr22:23412309-23412319 chr22:23412309-23412318 chr22:23412310-23412319 chr22:23412309-23412318 chr22:23412308-23412320
29	CTCF	chr22:23412419-23412542	Lung_OC	lung:	n/a	n/a
30	MYC	chr22:23412210-23412478	NB4	blood:	n/a	n/a
31	CTCF	chr22:23411896-23413286	K562	blood:	n/a	chr22:23413008-23413021 chr22:23412210-23412223 chr22:23413010-23413023
32	MYC	chr22:23412296-23412446	MCF-7	breast:	n/a	n/a
33	POLR2A	chr22:23412095-23412444	A549	lung:	n/a	n/a
34	MAX	chr22:23412141-23412531	SK-N-SH	brain:	n/a	n/a
35	RCOR1	chr22:23411193-23412832	K562	blood:	n/a	n/a
36	ETS1	chr22:23411598-23412550	K562	blood:	n/a	chr22:23411890-23411901 chr22:23411886-23411897 chr22:23411893-23411904
37	POLR2A	chr22:23411711-23412803	HEK293	kidney:	n/a	n/a
38	ELF1	chr22:23412057-23413192	K562	blood:	n/a	chr22:23413102-23413114 chr22:23413140-23413152
39	MXI1	chr22:23411698-23412477	K562	blood:	n/a	n/a
40	MAZ	chr22:23411578-23413369	IMR90	lung:	n/a	chr22:23412636-23412645 chr22:23411886-23411896 chr22:23411889-23411899
41	SP1	chr22:23411962-23412539	A549	lung:	n/a	chr22:23412308-23412319 chr22:23412308-23412320 chr22:23412309-23412319 chr22:23412309-23412318 chr22:23412310-23412319 chr22:23412309-23412318 chr22:23412308-23412320
42	NFYB	chr22:23411865-23412560	GM12878	blood:	n/a	n/a
43	YY1	chr22:23411927-23412506	K562	blood:	n/a	chr22:23412467-23412481 chr22:23412262-23412276
44	CTCF	chr22:23412360-23412510	GM12873	blood:	n/a	n/a
45	POLR2A	chr22:23411987-23412779	Raji	blood:	n/a	n/a
46	SP2	chr22:23411994-23412554	K562	blood:	n/a	chr22:23412330-23412353
47	SIN3AK20	chr22:23412117-23412515	HepG2	liver:	n/a	n/a
48	TBP	chr22:23411704-23412470	K562	blood:	n/a	n/a
49	SIN3A	chr22:23412221-23413666	H1-hESC	embryonic stem cell:	n/a	chr22:23412968-23412977
50	CTCF	chr22:23412405-23412539	Pancreas_OC	pancreas:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:23412408-23412458	HNPCEpiC	eye:	n/a
2	chr22:23412408-23412458	ECC-1	luminal epithelium:	n/a
3	chr22:23412408-23412458	AG04450	lung:	fetal
4	chr22:23412408-23412458	LNCaP	prostate:	n/a
5	chr22:23412408-23412458	SAEC	small airway:	n/a
6	chr22:23412408-23412458	HCM	heart:	n/a
7	chr22:23412408-23412458	HMEC	breast:	n/a
8	chr22:23412408-23412458	HL-60	blood:	n/a
9	chr22:23412408-23412458	HAEpiC	amniotic membrane:	n/a
10	chr22:23412408-23412458	HCT-116	colon:	n/a
11	chr22:23412408-23412458	SK-N-SH	brain:	n/a
12	chr22:23412408-23412458	K562	blood:	n/a
13	chr22:23412408-23412458	SKMC	muscle:	n/a
14	chr22:23412408-23412458	Caco-2	colon:	n/a
15	chr22:23412408-23412458	T-47D	breast:	n/a
16	chr22:23412408-23412458	H1-hESC	embryonic stem cell:	embryo
17	chr22:23412408-23412458	PANC-1	pancreas:	n/a
18	chr22:23412408-23412458	NHDF-neo	bronchial:	n/a
19	chr22:23412408-23412458	MCF-7	breast:	n/a
20	chr22:23412408-23412458	Jurkat	blood:	n/a
21	chr22:23412408-23412458	CMK	blood:	n/a
22	chr22:23412408-23412458	PFSK-1	brain:	n/a
23	chr22:23412408-23412458	HUVEC	blood vessel:	n/a
24	chr22:23412408-23412458	GM12891	blood:	n/a
25	chr22:23412408-23412458	HCPEpiC	choroid plexus:	n/a
26	chr22:23412408-23412458	U87	brain:	n/a
27	chr22:23412408-23412458	IMR90	lung:	fetal
28	chr22:23412408-23412458	Hela-S3	cervix:	n/a
29	chr22:23412408-23412458	HEEpiC	esophagus:	n/a
30	chr22:23412408-23412458	HIPEpiC	eye:	n/a
31	chr22:23412408-23412458	AG04449	skin:	fetal
32	chr22:23412408-23412458	A549	lung:	n/a
33	chr22:23412408-23412458	AoSMC	blood vessel:	n/a
34	chr22:23412408-23412458	MCF10A-Er-Src	breast:	n/a
35	chr22:23412408-23412458	HRPEpiC	eye:	n/a
36	chr22:23412408-23412458	GM19239	blood:	n/a
37	chr22:23412408-23412458	HRE	kidney:	n/a
38	chr22:23412408-23412458	ProgFib	skin:	n/a
39	chr22:23412408-23412458	NT2-D1	testis:	n/a
40	chr22:23412408-23412458	NHBE	bronchial:	n/a
41	chr22:23412408-23412458	AG10803	skin:	n/a
42	chr22:23412408-23412458	ovcar-3	ovarian:	n/a
43	chr22:23412408-23412458	BE2_C	brain:	n/a
44	chr22:23412408-23412458	HRCEpiC	kidney:	n/a
45	chr22:23412408-23412458	Hepatocyte	liver:	n/a
46	chr22:23412408-23412458	NB4	blood:	n/a
47	chr22:23412408-23412458	GM12878	blood:	n/a
48	chr22:23412408-23412458	RPTEC	kidney:	n/a
49	chr22:23412408-23412458	NH-A	brain:	n/a
50	chr22:23412408-23412458	HEK293	kidney:	embryo

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:23410484..23412785-chr22:23485960..23488893,2	K562	blood:

Variant related genes	Relation type
GNAZ	TF binding region
GNAZ	CpG island
ENSG00000100228	Chromatin interaction
ENSG00000100218	Chromatin interaction

Extended variants
information (count: 48 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803110	chr22:22731758-23497674	Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
2	nsv915235	chr22:22971768-23650987	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	101 gene(s)	inside rSNPs	diseases
3	esv3388845	chr22:22973346-23652447	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	100 gene(s)	inside rSNPs	diseases
4	nsv531799	chr22:22993679-23642142	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
5	nsv1061433	chr22:22997799-23649107	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
6	nsv521695	chr22:22998337-23648009	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
7	nsv915236	chr22:22998337-23650987	Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
8	nsv588512	chr22:22998337-23667731	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
9	nsv531800	chr22:23002708-23648163	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
10	nsv916593	chr22:23002709-23648790	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
11	nsv993496	chr22:23002709-23654222	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
12	nsv1067002	chr22:23007167-23643363	Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
13	nsv1067324	chr22:23007367-23654223	Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
14	nsv533839	chr22:23012013-23643223	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
15	nsv916933	chr22:23012069-23654237	Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
16	nsv531801	chr22:23028586-23657804	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	92 gene(s)	inside rSNPs	diseases
17	nsv531802	chr22:23046186-23627391	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	diseases
18	nsv1060509	chr22:23055148-23648719	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	83 gene(s)	inside rSNPs	diseases
19	nsv1056324	chr22:23055148-23750989	Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
20	nsv1062780	chr22:23060449-23648719	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	diseases
21	nsv948942	chr22:23063178-23645718	Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	diseases
22	nsv1063200	chr22:23097177-23643224	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	80 gene(s)	inside rSNPs	diseases
23	nsv949250	chr22:23157485-23645718	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	69 gene(s)	inside rSNPs	diseases
24	esv34158	chr22:23216762-23499513	Weak transcription Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
25	nsv914575	chr22:23399743-23467804	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
26	nsv914576	chr22:23399743-23469918	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
27	nsv544606	chr22:23400739-23416402	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
28	nsv544607	chr22:23400739-23417836	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
29	nsv544608	chr22:23400739-23423230	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
30	esv1806531	chr22:23400739-23448258	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
31	nsv544609	chr22:23400739-23455790	Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
32	nsv1057659	chr22:23400739-24138788	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
33	nsv544610	chr22:23404534-23416402	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
34	nsv544611	chr22:23404534-23417836	Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
35	nsv544612	chr22:23404534-23419488	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
36	nsv544613	chr22:23408495-23417836	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
37	nsv544614	chr22:23410046-23419488	Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
38	esv3324778	chr22:23411477-23414325	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
39	esv3337920	chr22:23411602-23413550	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
40	esv3494959	chr22:23411602-23413900	Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
41	esv3494960	chr22:23411602-23413900	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
42	nsv588589	chr22:23412017-23413060	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
43	esv1803191	chr22:23412017-23413130	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
44	esv1804044	chr22:23412017-23413130	Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
45	esv21337	chr22:23412337-23413200	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
46	nsv588590	chr22:23412364-23413009	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
47	nsv588591	chr22:23412364-23413060	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
48	nsv588592	chr22:23412364-23413130	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:23411600-23413200	Enhancers	Fetal Heart	heart
2	chr22:23411600-23413600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
3	chr22:23411600-23413600	Active TSS	Colon Smooth Muscle	Colon
4	chr22:23411600-23413800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
5	chr22:23411800-23412800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
6	chr22:23411800-23412800	Active TSS	Psoas Muscle	Psoas
7	chr22:23411800-23413000	Bivalent/Poised TSS	Rectal Mucosa Donor 31	rectum
8	chr22:23411800-23413000	Bivalent/Poised TSS	NHEK	skin
9	chr22:23411800-23413200	Active TSS	Primary T helper naive cells from peripheral blood	blood
10	chr22:23411800-23413200	Active TSS	Aorta	Aorta
11	chr22:23411800-23413400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr22:23411800-23413400	Active TSS	Esophagus	oesophagus
13	chr22:23411800-23413400	Transcr. at gene 5' and 3'	Right Atrium	heart
14	chr22:23411800-23413600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr22:23411800-23413600	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr22:23411800-23413600	Active TSS	Brain Substantia Nigra	brain
17	chr22:23411800-23413600	Active TSS	Duodenum Smooth Muscle	Duodenum
18	chr22:23411800-23413600	Active TSS	Hela-S3	cervix
19	chr22:23411800-23413600	Active TSS	NH-A	brain
20	chr22:23411800-23414000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
21	chr22:23411800-23414200	Active TSS	Pancreatic Islets	Pancreatic Islet
22	chr22:23412000-23412800	Active TSS	Left Ventricle	heart
23	chr22:23412000-23412800	Bivalent/Poised TSS	Thymus	Thymus
24	chr22:23412000-23413000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
25	chr22:23412000-23413000	Active TSS	Sigmoid Colon	Sigmoid Colon
26	chr22:23412000-23413000	Active TSS	Spleen	Spleen
27	chr22:23412000-23413200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
28	chr22:23412000-23413200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr22:23412000-23413400	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr22:23412000-23413600	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr22:23412000-23413600	Active TSS	Brain Cingulate Gyrus	brain
32	chr22:23412000-23413600	Active TSS	Gastric	stomach
33	chr22:23412000-23413600	Active TSS	A549	lung
34	chr22:23412000-23413800	Active TSS	Brain Anterior Caudate	brain
35	chr22:23412000-23414200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
36	chr22:23412200-23412600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr22:23412200-23412800	Bivalent/Poised TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr22:23412200-23412800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr22:23412200-23412800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr22:23412200-23412800	Bivalent/Poised TSS	Primary neutrophils fromperipheralblood	blood
41	chr22:23412200-23412800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
42	chr22:23412200-23412800	Active TSS	Primary T helper cells PMA-I stimulated	--
43	chr22:23412200-23412800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
44	chr22:23412200-23412800	Active TSS	Primary T helper cells fromperipheralblood	blood
45	chr22:23412200-23412800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr22:23412200-23412800	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
47	chr22:23412200-23412800	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr22:23412200-23412800	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr22:23412200-23412800	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr22:23412200-23412800	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland

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