Variant report

Variant	rs538518206
Chromosome Location	chr6:54880725-54880726
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3364886	chr6:54880042-54912395	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54877200-54881200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr6:54879400-54881400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:54879600-54880800	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr6:54879600-54880800	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr6:54879800-54882400	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr6:54880000-54881200	Weak transcription	Fetal Stomach	stomach
7	chr6:54880000-54881400	Weak transcription	Stomach Mucosa	stomach
8	chr6:54880000-54881600	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr6:54880400-54883200	Enhancers	Fetal Intestine Large	intestine
10	chr6:54880400-54883200	Enhancers	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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