Variant report

Variant	rs538593132
Chromosome Location	chr14:67862411-67862412
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr14:67862411-67862919	HUVEC	blood vessel:	n/a	chr14:67862741-67862752

Variant related genes	Relation type
PLEK2	TF binding region

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
5	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
6	nsv1054389	chr14:67804987-67922598	Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
7	nsv542121	chr14:67804987-67922598	Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
8	esv1815452	chr14:67862371-67866671	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv1822467	chr14:67862371-67866671	Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv1843609	chr14:67862371-67866671	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67831200-67864600	Strong transcription	Duodenum Mucosa	Duodenum
2	chr14:67835200-67863400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
3	chr14:67845000-67864800	Strong transcription	Hela-S3	cervix
4	chr14:67846000-67876200	Weak transcription	Stomach Mucosa	stomach
5	chr14:67849600-67864400	Weak transcription	Gastric	stomach
6	chr14:67850200-67878400	Weak transcription	Lung	lung
7	chr14:67851000-67863200	Weak transcription	Fetal Lung	lung
8	chr14:67852200-67863200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr14:67852800-67863200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr14:67852800-67865800	Strong transcription	HMEC	breast
11	chr14:67853200-67862600	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr14:67853800-67862800	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr14:67853800-67864600	Strong transcription	Fetal Intestine Small	intestine
14	chr14:67854000-67863000	Weak transcription	HSMM	muscle
15	chr14:67854200-67862600	Weak transcription	NH-A	brain
16	chr14:67854200-67864400	Weak transcription	Left Ventricle	heart
17	chr14:67854200-67872000	Weak transcription	Small Intestine	intestine
18	chr14:67854400-67863200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr14:67854600-67862600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr14:67855200-67863200	Weak transcription	A549	lung
21	chr14:67855200-67867400	Strong transcription	NHEK	skin
22	chr14:67855200-67875400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr14:67858600-67867400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr14:67859600-67876600	Weak transcription	Esophagus	oesophagus
25	chr14:67859800-67866600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr14:67860000-67863000	Weak transcription	Placenta	Placenta
27	chr14:67860000-67863200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr14:67860000-67863200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr14:67860000-67876400	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr14:67860800-67878000	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr14:67861200-67863200	Enhancers	Fetal Heart	heart
32	chr14:67861600-67864400	Strong transcription	Fetal Stomach	stomach
33	chr14:67861800-67862600	Strong transcription	Pancreas	Pancrea
34	chr14:67861800-67863600	Enhancers	HUVEC	blood vessel
35	chr14:67861800-67864600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr14:67861800-67864600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr14:67862000-67862600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr14:67862000-67863400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr14:67862000-67876600	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr14:67862200-67862600	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
41	chr14:67862200-67862600	Enhancers	Spleen	Spleen
42	chr14:67862200-67863200	Weak transcription	Rectal Mucosa Donor 29	rectum
43	chr14:67862200-67863600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
44	chr14:67862400-67862600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr14:67862400-67863200	Weak transcription	Fetal Intestine Large	intestine
46	chr14:67862400-67863400	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr14:67862400-67863600	Enhancers	HUES6 Cell Line	embryonic stem cell
48	chr14:67862400-67863600	Enhancers	HSMMtube	muscle
49	chr14:67862400-67867000	Weak transcription	Colonic Mucosa	Colon

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