Variant report

Variant	rs538595996
Chromosome Location	chr14:22026856-22026857
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:21992613..21994991-chr14:22023971..22027172,3	MCF-7	breast:
2	chr14:21973675..21975896-chr14:22025670..22027377,2	K562	blood:
3	chr14:21965159..21967752-chr14:22024395..22027094,3	MCF-7	breast:
4	chr14:21924893..21927310-chr14:22025908..22027691,2	MCF-7	breast:
5	chr14:21967474..21971361-chr14:22024015..22027387,4	K562	blood:
6	chr14:21992702..21995235-chr14:22025851..22027508,2	MCF-7	breast:
7	chr14:21977743..21979409-chr14:22025711..22027311,2	MCF-7	breast:
8	chr14:21920487..21922839-chr14:22025692..22028469,2	K562	blood:
9	chr14:21979431..21980947-chr14:22025608..22027226,2	K562	blood:
10	chr14:21965103..21966895-chr14:22024708..22027624,2	K562	blood:
11	chr14:21922916..21925515-chr14:22024387..22026988,2	K562	blood:
12	chr14:21978852..21980504-chr14:22026086..22028034,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530009	chr14:21377022-22044608	Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
2	nsv530769	chr14:21407536-22139126	Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
3	nsv1036762	chr14:21507093-22101805	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
4	nsv541976	chr14:21507093-22101805	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
5	esv3518898	chr14:21805983-22077584	Flanking Active TSS Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
6	esv3518899	chr14:21805983-22077584	Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
7	esv2422459	chr14:21931624-22169502	Genic enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
8	nsv1049871	chr14:21992049-22053477	Genic enhancers Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
9	esv20972	chr14:22026513-22035999	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:22018800-22035200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:22024400-22027000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr14:22025400-22027000	Enhancers	Placenta	Placenta
4	chr14:22025800-22027200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr14:22026400-22027000	Flanking Active TSS	HepG2	liver
6	chr14:22026600-22027800	Enhancers	H1 Cell Line	embryonic stem cell
7	chr14:22026800-22027000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr14:22026800-22027000	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr14:22026800-22027000	Enhancers	Colonic Mucosa	Colon
10	chr14:22026800-22027000	Enhancers	Fetal Kidney	kidney
11	chr14:22026800-22027000	Enhancers	Fetal Lung	lung
12	chr14:22026800-22027200	Enhancers	H9 Cell Line	embryonic stem cell
13	chr14:22026800-22027400	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr14:22026800-22038200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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