The 2.0 version of rSNPBase

Variant report

Variant rs538663246
Chromosome Location chr1:185409428-185409429
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185401400-185409600 Enhancers Primary neutrophils fromperipheralblood blood
2 chr1:185402400-185410800 Weak transcription Left Ventricle heart
3 chr1:185406800-185409600 Enhancers Primary monocytes fromperipheralblood blood
4 chr1:185407000-185412000 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr1:185407200-185410600 Weak transcription HUVEC blood vessel
6 chr1:185407400-185412200 Weak transcription Right Atrium heart
7 chr1:185407600-185409600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:185407600-185411400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:185407800-185409600 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr1:185407800-185410200 Enhancers Primary T helper cells PMA-I stimulated --
11 chr1:185407800-185410400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:185407800-185410600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr1:185407800-185411000 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr1:185407800-185411400 Enhancers Muscle Satellite Cultured Cells --
15 chr1:185407800-185411600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:185407800-185411600 Enhancers Hela-S3 cervix
17 chr1:185407800-185411800 Enhancers HSMMtube muscle
18 chr1:185408000-185409800 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:185408000-185410800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr1:185408000-185411200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:185408200-185409800 Enhancers Primary B cells from peripheral blood blood
22 chr1:185408200-185409800 Enhancers Primary T regulatory cells fromperipheralblood blood
23 chr1:185408200-185411200 Enhancers NHDF-Ad bronchial
24 chr1:185408200-185411600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:185408200-185411600 Enhancers Fetal Intestine Large intestine
26 chr1:185408200-185411600 Enhancers Fetal Intestine Small intestine
27 chr1:185408200-185411600 Enhancers HMEC breast
28 chr1:185408200-185411600 Enhancers NHEK skin
29 chr1:185408200-185411800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:185408200-185411800 Enhancers Placenta Placenta
31 chr1:185408200-185412000 Enhancers Primary T cells fromperipheralblood blood
32 chr1:185408400-185409600 Enhancers GM12878-XiMat blood
33 chr1:185408400-185409600 Enhancers NH-A brain
34 chr1:185408400-185409800 Enhancers Primary T helper cells fromperipheralblood blood
35 chr1:185408400-185410400 Enhancers A549 lung
36 chr1:185408600-185409800 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr1:185408600-185409800 Enhancers Placenta Amnion Placenta Amnion
38 chr1:185408600-185411600 Enhancers Osteobl bone
39 chr1:185408800-185409600 Enhancers Thymus Thymus
40 chr1:185408800-185410400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:185408800-185410400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:185409000-185410400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:185409000-185410600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:185409000-185412000 Enhancers Fetal Heart heart
45 chr1:185409200-185410200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:185409200-185410400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:185409200-185410400 Weak transcription HSMM muscle
48 chr1:185409400-185410400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015