The 2.0 version of rSNPBase

Variant report

Variant rs538698892
Chromosome Location chr6:126661772-126661773
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:126660600-126662400 Active TSS iPS-20b Cell Line embryonic stem cell
2 chr6:126660600-126663800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr6:126660800-126661800 Active TSS Breast Myoepithelial Primary Cells Breast
4 chr6:126660800-126661800 Active TSS Primary T helper naive cells fromperipheralblood blood
5 chr6:126660800-126661800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
6 chr6:126660800-126661800 Active TSS Brain Angular Gyrus brain
7 chr6:126660800-126661800 Active TSS Brain Cingulate Gyrus brain
8 chr6:126660800-126661800 Active TSS Brain Hippocampus Middle brain
9 chr6:126660800-126661800 Active TSS Colon Smooth Muscle Colon
10 chr6:126660800-126661800 Active TSS Duodenum Smooth Muscle Duodenum
11 chr6:126660800-126661800 Active TSS Fetal Brain Male brain
12 chr6:126660800-126661800 Active TSS Fetal Intestine Large intestine
13 chr6:126660800-126661800 Active TSS Fetal Intestine Small intestine
14 chr6:126660800-126661800 Active TSS Pancreatic Islets Pancreatic Islet
15 chr6:126660800-126661800 Active TSS Fetal Lung lung
16 chr6:126660800-126661800 Active TSS Fetal Muscle Leg muscle
17 chr6:126660800-126661800 Active TSS Rectal Mucosa Donor 29 rectum
18 chr6:126660800-126661800 Active TSS Rectal Mucosa Donor 31 rectum
19 chr6:126660800-126661800 Active TSS Stomach Smooth Muscle stomach
20 chr6:126660800-126661800 Active TSS HUVEC blood vessel
21 chr6:126660800-126661800 Active TSS Osteobl bone
22 chr6:126660800-126662000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:126660800-126662000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:126660800-126662000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:126660800-126662000 Flanking Active TSS Primary monocytes fromperipheralblood blood
26 chr6:126660800-126662000 Active TSS Primary hematopoietic stem cells short term culture blood
27 chr6:126660800-126662000 Active TSS Fetal Brain Female brain
28 chr6:126660800-126662000 Active TSS HMEC breast
29 chr6:126660800-126662200 Active TSS H1 Cell Line embryonic stem cell
30 chr6:126660800-126662200 Active TSS HUES64 Cell Line embryonic stem cell
31 chr6:126660800-126662200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:126660800-126662200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
33 chr6:126660800-126662200 Active TSS Muscle Satellite Cultured Cells --
34 chr6:126660800-126662200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
35 chr6:126660800-126662200 Active TSS Aorta Aorta
36 chr6:126660800-126662200 Active TSS Colonic Mucosa Colon
37 chr6:126660800-126662200 Active TSS Fetal Kidney kidney
38 chr6:126660800-126662200 Active TSS GM12878-XiMat blood
39 chr6:126660800-126662200 Active TSS HSMM muscle
40 chr6:126660800-126662200 Active TSS NH-A brain
41 chr6:126660800-126662200 Active TSS NHEK skin
42 chr6:126660800-126662400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:126660800-126662400 Active TSS iPS-18 Cell Line embryonic stem cell
44 chr6:126660800-126662400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:126660800-126662400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr6:126660800-126662400 Active TSS A549 lung
47 chr6:126660800-126662600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:126660800-126662600 Active TSS NHDF-Ad bronchial
49 chr6:126660800-126662800 Active TSS ES-I3 Cell Line embryonic stem cell
50 chr6:126660800-126662800 Active TSS H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015