Variant report

Variant rs538711183
Chromosome Location chr13:39897293-39897294
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:39891000-39899200 Weak transcription Fetal Heart heart
2 chr13:39892200-39901200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr13:39893000-39898400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr13:39893400-39897600 Enhancers Adipose Nuclei Adipose
5 chr13:39893600-39899000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr13:39893800-39899000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr13:39894200-39899000 Weak transcription Right Ventricle heart
8 chr13:39894200-39899000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr13:39894400-39899000 Weak transcription Left Ventricle heart
10 chr13:39894600-39898800 Weak transcription Lung lung
11 chr13:39894600-39899000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr13:39895400-39899000 Weak transcription Right Atrium heart
13 chr13:39895600-39898000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr13:39895800-39897600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr13:39895800-39897800 Enhancers Brain Substantia Nigra brain
16 chr13:39896000-39899200 Weak transcription Fetal Muscle Leg muscle
17 chr13:39896200-39897800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr13:39896200-39897800 Enhancers Brain Anterior Caudate brain
19 chr13:39896400-39897600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr13:39896400-39897600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr13:39896600-39897400 Enhancers Aorta Aorta
22 chr13:39896600-39897400 Enhancers Brain Cingulate Gyrus brain
23 chr13:39896600-39897400 Enhancers Fetal Lung lung
24 chr13:39896600-39897600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr13:39896600-39897600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr13:39897200-39897400 Enhancers H1 Cell Line embryonic stem cell
27 chr13:39897200-39897400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr13:39897200-39897400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr13:39897200-39897400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr13:39897200-39897400 Active TSS Brain Hippocampus Middle brain
31 chr13:39897200-39897400 Flanking Active TSS Brain Inferior Temporal Lobe brain
32 chr13:39897200-39897400 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr13:39897200-39897400 Enhancers Fetal Kidney kidney
34 chr13:39897200-39897400 Enhancers Ovary ovary
35 chr13:39897200-39897400 Enhancers Sigmoid Colon Sigmoid Colon
36 chr13:39897200-39897600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr13:39897200-39897600 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr13:39897200-39897600 Flanking Active TSS Brain Angular Gyrus brain
39 chr13:39897200-39897800 Enhancers Fetal Stomach stomach
40 chr13:39897200-39899200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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