Variant report

Variant	rs538828827
Chromosome Location	chr7:117130681-117130682
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889076	chr7:117064625-117147547	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv889077	chr7:117129404-117238379	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117124000-117132200	Enhancers	Fetal Intestine Small	intestine
2	chr7:117126800-117151200	Weak transcription	Pancreas	Pancrea
3	chr7:117127400-117132400	Weak transcription	Dnd41	blood
4	chr7:117128400-117131000	Enhancers	Fetal Intestine Large	intestine
5	chr7:117128800-117131200	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr7:117129200-117130800	Enhancers	A549	lung
7	chr7:117129400-117130800	Enhancers	Liver	Liver
8	chr7:117129600-117130800	Enhancers	Stomach Mucosa	stomach
9	chr7:117129800-117144600	Weak transcription	Duodenum Mucosa	Duodenum
10	chr7:117130600-117130800	Enhancers	Rectal Mucosa Donor 29	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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